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NM_000222.3(KIT):c.1727T>C (p.Leu576Pro) AND Thymoma

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Oct 2, 2014
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000443552.2

Allele description [Variation Report for NM_000222.3(KIT):c.1727T>C (p.Leu576Pro)]

NM_000222.3(KIT):c.1727T>C (p.Leu576Pro)

Gene:
KIT:KIT proto-oncogene, receptor tyrosine kinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
4q12
Genomic location:
Preferred name:
NM_000222.3(KIT):c.1727T>C (p.Leu576Pro)
HGVS:
  • NC_000004.12:g.54727495T>C
  • NG_007456.1:g.74501T>C
  • NM_000222.3:c.1727T>CMANE SELECT
  • NM_001093772.2:c.1715T>C
  • NM_001385284.1:c.1730T>C
  • NM_001385285.1:c.1727T>C
  • NM_001385286.1:c.1715T>C
  • NM_001385288.1:c.1718T>C
  • NM_001385290.1:c.1730T>C
  • NM_001385292.1:c.1718T>C
  • NP_000213.1:p.Leu576Pro
  • NP_000213.1:p.Leu576Pro
  • NP_001087241.1:p.Leu572Pro
  • NP_001372213.1:p.Leu577Pro
  • NP_001372214.1:p.Leu576Pro
  • NP_001372215.1:p.Leu572Pro
  • NP_001372217.1:p.Leu573Pro
  • NP_001372219.1:p.Leu577Pro
  • NP_001372221.1:p.Leu573Pro
  • LRG_307t1:c.1727T>C
  • LRG_307:g.74501T>C
  • LRG_307p1:p.Leu576Pro
  • NC_000004.11:g.55593661T>C
  • NM_000222.2:c.1727T>C
Protein change:
L572P
Links:
dbSNP: rs121913513
NCBI 1000 Genomes Browser:
rs121913513
Molecular consequence:
  • NM_000222.3:c.1727T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001093772.2:c.1715T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001385284.1:c.1730T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001385285.1:c.1727T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001385286.1:c.1715T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001385288.1:c.1718T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001385290.1:c.1730T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001385292.1:c.1718T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Thymoma
Identifiers:
MONDO: MONDO:0006456; MeSH: D013945; MedGen: C0040100; Human Phenotype Ontology: HP:0100522

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000504191Database of Curated Mutations (DoCM)
no assertion criteria provided
Pathogenic
(Oct 2, 2014)
somaticliterature only

PubMed (3)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedsomaticyesnot providednot providednot providednot providednot providedliterature only

Citations

PubMed

L576P KIT mutation in anal melanomas correlates with KIT protein expression and is sensitive to specific kinase inhibition.

Antonescu CR, Busam KJ, Francone TD, Wong GC, Guo T, Agaram NP, Besmer P, Jungbluth A, Gimbel M, Chen CT, Veach D, Clarkson BD, Paty PB, Weiser MR.

Int J Cancer. 2007 Jul 15;121(2):257-64.

PubMed [citation]
PMID:
17372901

Mutational status of EGFR and KIT in thymoma and thymic carcinoma.

Yoh K, Nishiwaki Y, Ishii G, Goto K, Kubota K, Ohmatsu H, Niho S, Nagai K, Saijo N.

Lung Cancer. 2008 Dec;62(3):316-20. doi: 10.1016/j.lungcan.2008.03.013. Epub 2008 Apr 29.

PubMed [citation]
PMID:
18448188
See all PubMed Citations (3)

Details of each submission

From Database of Curated Mutations (DoCM), SCV000504191.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (3)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1somaticyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024