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NM_001037161.2(ACOT1):c.410_423del (p.Glu137fs) AND Generalized hypotonia

Germline classification:
Pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000416479.1

Allele description [Variation Report for NM_001037161.2(ACOT1):c.410_423del (p.Glu137fs)]

NM_001037161.2(ACOT1):c.410_423del (p.Glu137fs)

Genes:
HEATR4:HEAT repeat containing 4 [Gene - HGNC]
ACOT1:acyl-CoA thioesterase 1 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
14q24.3
Genomic location:
Preferred name:
NM_001037161.2(ACOT1):c.410_423del (p.Glu137fs)
HGVS:
  • NC_000014.9:g.73537831_73537844del
  • NM_001037161.2:c.410_423delMANE SELECT
  • NM_001220484.1:c.-151-7595_-151-7582delMANE SELECT
  • NM_203309.2:c.-72-14615_-72-14602del
  • NP_001032238.1:p.Glu137fs
  • NC_000014.8:g.74004535_74004548del
  • NM_001037161.1:c.410_423delAGCCGGTGCGCGCG
Protein change:
E137fs
Links:
dbSNP: rs1057519450
NCBI 1000 Genomes Browser:
rs1057519450
Molecular consequence:
  • NM_001037161.2:c.410_423del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001220484.1:c.-151-7595_-151-7582del - intron variant - [Sequence Ontology: SO:0001627]
  • NM_203309.2:c.-72-14615_-72-14602del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:
Generalized hypotonia
Identifiers:
MedGen: C1858120; Human Phenotype Ontology: HP:0001290

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000494189Lupski Lab, Baylor-Hopkins CMG, Baylor College of Medicine
no assertion criteria provided
Pathogenicgermlineresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedresearch

Details of each submission

From Lupski Lab, Baylor-Hopkins CMG, Baylor College of Medicine, SCV000494189.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided

Description

This variant was identified as homozygous in an individual with congenital hypotonia and concern for mitochondrial myopathy.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 1, 2024