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NM_000551.4(VHL):c.3G>T (p.Met1Ile) AND Von Hippel-Lindau syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 8, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000411808.3

Allele description [Variation Report for NM_000551.4(VHL):c.3G>T (p.Met1Ile)]

NM_000551.4(VHL):c.3G>T (p.Met1Ile)

Gene:
VHL:von Hippel-Lindau tumor suppressor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p25.3
Genomic location:
Preferred name:
NM_000551.4(VHL):c.3G>T (p.Met1Ile)
HGVS:
  • NC_000003.12:g.10141850G>T
  • NG_008212.3:g.5216G>T
  • NM_000551.4:c.3G>TMANE SELECT
  • NM_001354723.2:c.3G>T
  • NM_198156.3:c.3G>T
  • NP_000542.1:p.Met1Ile
  • NP_000542.1:p.Met1Ile
  • NP_001341652.1:p.Met1Ile
  • NP_937799.1:p.Met1Ile
  • LRG_322t1:c.3G>T
  • LRG_322:g.5216G>T
  • LRG_322p1:p.Met1Ile
  • NC_000003.11:g.10183534G>T
  • NM_000551.3:c.3G>T
Protein change:
M1I
Links:
dbSNP: rs578091032
NCBI 1000 Genomes Browser:
rs578091032
Molecular consequence:
  • NM_000551.4:c.3G>T - initiator_codon_variant - [Sequence Ontology: SO:0001582]
  • NM_001354723.2:c.3G>T - initiator_codon_variant - [Sequence Ontology: SO:0001582]
  • NM_198156.3:c.3G>T - initiator_codon_variant - [Sequence Ontology: SO:0001582]
  • NM_000551.4:c.3G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354723.2:c.3G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198156.3:c.3G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Von Hippel-Lindau syndrome (VHLS)
Synonyms:
VHL syndrome; Von Hippel-Lindau
Identifiers:
MONDO: MONDO:0008667; MedGen: C0019562; Orphanet: 892; OMIM: 193300

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000488346Counsyl
criteria provided, single submitter

(Counsyl Autosomal Dominant Disease Classification criteria (2015))
Uncertain significance
(Mar 8, 2016)
unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Counsyl Autosomal Dominant Disease Classification criteria (2015)

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

Genetic deletion of the long isoform of the von Hippel-Lindau tumour suppressor gene product alters microtubule dynamics.

Frew IJ, Smole Z, Thoma CR, Krek W.

Eur J Cancer. 2013 Jul;49(10):2433-40. doi: 10.1016/j.ejca.2013.02.024. Epub 2013 Mar 27.

PubMed [citation]
PMID:
23541568

Details of each submission

From Counsyl, SCV000488346.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024