NM_016065.4(MRPS16):c.*1291_*1293del AND Combined oxidative phosphorylation deficiency

NM_016065.4(MRPS16):c.1291_1293del AND Combined oxidative phosphorylation deficiency

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jun 14, 2016
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000372896.5

Allele description [Variation Report for NM_016065.4(MRPS16):c.1291_1293del]

NM_016065.4(MRPS16):c.1291_1293del

Genes:

DNAJC9-AS1:DNAJC9 and MRPS16 antisense RNA 1 [Gene - HGNC]
MRPS16:mitochondrial ribosomal protein S16 [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

10q22.2

Genomic location:

Preferred name:

NM_016065.4(MRPS16):c.*1291_*1293del

HGVS:

NC_000010.11:g.73249561_73249563del
NG_008096.1:g.8133_8135del
NM_016065.4:c.*1291_*1293delMANE SELECT
NC_000010.10:g.75009319_75009321del
NM_016065.3:c.*1291_*1293delCTT

Links:

dbSNP: rs767465725

NCBI 1000 Genomes Browser:

rs767465725

Molecular consequence:

NM_016065.4:c.*1291_*1293del - 3 prime UTR variant - [Sequence Ontology: SO:0001624]

Condition(s)

Name:: Combined oxidative phosphorylation deficiency
Identifiers:: MONDO: MONDO:0000732; MedGen: C4540031; OMIM: PS609060

Recent activity

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Danio rerio histone deacetylase 3 (hdac3), mRNA
Danio rerio histone deacetylase 3 (hdac3), mRNA
gi|41055868|ref|NM_200990.1|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000364819	Illumina Laboratory Services, Illumina	criteria provided, single submitter (ICSL Variant Classification 20161018)	Uncertain significance (Jun 14, 2016)	germline	clinical testing	ICSL_Variant_Classification_20161018.pdf Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000364819

Illumina Laboratory Services, Illumina

criteria provided, single submitter

(ICSL Variant Classification 20161018)

Uncertain significance
(Jun 14, 2016)

germline

clinical testing

ICSL_Variant_Classification_20161018.pdf

Citation Link

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Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Illumina Laboratory Services, Illumina, SCV000364819.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 9, 2023

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