ClinVar

NM_001136472.2(LITAF):c.*1870C>T

Gene:

LITAF:lipopolysaccharide induced TNF factor [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

16p13.13

Genomic location:

• Chr16: 11547767 (on Assembly GRCh38)
• Chr16: 11641623 (on Assembly GRCh37)

Preferred name:

NM_001136472.2(LITAF):c.*1870C>T

HGVS:

• NC_000016.10:g.11547767G>A
• NG_009008.1:g.44184C>T
• NM_001136472.2:c.*1870C>TMANE SELECT
• NM_001136473.1:c.*1995C>T
• NM_004862.4:c.*1870C>T
• LRG_253t1:c.*1995C>T
• LRG_253:g.44184C>T
• NC_000016.9:g.11641623G>A
• NM_004862.3:c.*1870C>T
• NR_024320.2:n.2490C>T

This HGVS expression did not pass validation

Links:

dbSNP: rs150472475

NCBI 1000 Genomes Browser:

rs150472475

Molecular consequence:

• NM_001136472.2:c.*1870C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
• NM_001136473.1:c.*1995C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
• NM_004862.4:c.*1870C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
• NR_024320.2:n.2490C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]