NM_018451.5(CENPJ):c.*83_*85del AND Primary Microcephaly, Recessive

NM_018451.5(CENPJ):c.83_85del AND Primary Microcephaly, Recessive

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jun 14, 2016
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000346242.5

Allele description [Variation Report for NM_018451.5(CENPJ):c.83_85del]

NM_018451.5(CENPJ):c.83_85del

Genes:

CENPJ:centromere protein J [Gene - OMIM - HGNC]
RNF17:ring finger protein 17 [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

13q12.12

Genomic location:

Preferred name:

NM_018451.5(CENPJ):c.*83_*85del

HGVS:

NC_000013.11:g.24883094_24883096del
NG_009165.2:g.44854_44856del
NM_018451.5:c.*83_*85delMANE SELECT
NC_000013.10:g.25457232_25457234del
NM_018451.4:c.*83_*85delATT
NR_047594.2:n.4384_4386del
NR_047595.2:n.4182_4184del

Links:

dbSNP: rs747303248

NCBI 1000 Genomes Browser:

rs747303248

Molecular consequence:

NM_018451.5:c.*83_*85del - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
NR_047594.2:n.4384_4386del - non-coding transcript variant - [Sequence Ontology: SO:0001619]
NR_047595.2:n.4182_4184del - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:: Primary Microcephaly, Recessive
Identifiers:: MedGen: CN239428

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000383447	Illumina Laboratory Services, Illumina	criteria provided, single submitter (ICSL Variant Classification 20161018)	Uncertain significance (Jun 14, 2016)	germline	clinical testing	ICSL_Variant_Classification_20161018.pdf Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000383447

Illumina Laboratory Services, Illumina

criteria provided, single submitter

(ICSL Variant Classification 20161018)

Uncertain significance
(Jun 14, 2016)

germline

clinical testing

ICSL_Variant_Classification_20161018.pdf

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Illumina Laboratory Services, Illumina, SCV000383447.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Aug 25, 2024

ClinVar

Relating variation to medicine