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NM_201253.3(CRB1):c.1182C>A (p.Cys394Ter) AND not provided

Germline classification:
Pathogenic (2 submissions)
Last evaluated:
Sep 15, 2021
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000322587.7

Allele description [Variation Report for NM_201253.3(CRB1):c.1182C>A (p.Cys394Ter)]

NM_201253.3(CRB1):c.1182C>A (p.Cys394Ter)

Gene:
CRB1:crumbs cell polarity complex component 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q31.3
Genomic location:
Preferred name:
NM_201253.3(CRB1):c.1182C>A (p.Cys394Ter)
HGVS:
  • NC_000001.11:g.197421010C>A
  • NG_008483.2:g.224549C>A
  • NM_001193640.2:c.846C>A
  • NM_001257965.2:c.975C>A
  • NM_001257966.2:c.1182C>A
  • NM_201253.3:c.1182C>AMANE SELECT
  • NP_001180569.1:p.Cys282Ter
  • NP_001244894.1:p.Cys325Ter
  • NP_001244895.1:p.Cys394Ter
  • NP_957705.1:p.Cys394Ter
  • NC_000001.10:g.197390140C>A
  • NM_201253.2:c.1182C>A
  • NR_047563.2:n.1343C>A
  • NR_047564.2:n.1343C>A
Protein change:
C282*
Links:
dbSNP: rs115352681
NCBI 1000 Genomes Browser:
rs115352681
Molecular consequence:
  • NR_047563.2:n.1343C>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_047564.2:n.1343C>A - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NM_001193640.2:c.846C>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001257965.2:c.975C>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001257966.2:c.1182C>A - nonsense - [Sequence Ontology: SO:0001587]
  • NM_201253.3:c.1182C>A - nonsense - [Sequence Ontology: SO:0001587]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000338382Eurofins Ntd Llc (ga)
criteria provided, single submitter

(EGL Classification Definitions 2015)
Pathogenic
(Jan 20, 2016)
germlineclinical testing

Citation Link,

SCV001905545Institute of Medical Genetics and Applied Genomics, University Hospital Tübingen
criteria provided, single submitter

(ACMG Guidelines, 2015)
Pathogenic
(Sep 15, 2021)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot provided1not providedclinical testing
not providedgermlineunknown1not providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Eurofins Ntd Llc (ga), SCV000338382.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided1not providednot providednot provided

From Institute of Medical Genetics and Applied Genomics, University Hospital Tübingen, SCV001905545.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024