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NM_001849.4(COL6A2):c.-6G>A AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jan 25, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000270525.4

Allele description [Variation Report for NM_001849.4(COL6A2):c.-6G>A]

NM_001849.4(COL6A2):c.-6G>A

Gene:
COL6A2:collagen type VI alpha 2 chain [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
21q22.3
Genomic location:
Preferred name:
NM_001849.4(COL6A2):c.-6G>A
HGVS:
  • NC_000021.9:g.46111471G>A
  • NG_008675.1:g.18353G>A
  • NM_001849.4:c.-6G>AMANE SELECT
  • NM_058174.3:c.-6G>A
  • NM_058175.3:c.-6G>A
  • LRG_476:g.18353G>A
  • NC_000021.8:g.47531385G>A
Links:
dbSNP: rs757279009
NCBI 1000 Genomes Browser:
rs757279009
Molecular consequence:
  • NM_001849.4:c.-6G>A - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_058174.3:c.-6G>A - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_058175.3:c.-6G>A - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
Observations:
1

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

Recent activity

  • Homo sapiens unc-13 homolog D (C. elegans) (UNC13D), mRNA
    Homo sapiens unc-13 homolog D (C. elegans) (UNC13D), mRNA
    gi|46195764|ref|NM_199242.1|
    Nucleotide
  • Drosophila melanogaster
    Drosophila melanogaster
    Expression data from Drosophila melanogaster adults which contain transgenes to deliver a knockdown effect of Dhr96 expression, or over-expression of Dhr96, compared to control flies.
    BioProject
  • in-situ-BM
    in-situ-BM
    Adding hydrogen to increase the methane yield in continuous stirred tank reactors
    BioProject

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000338988Eurofins Ntd Llc (ga)
criteria provided, single submitter

(EGL Classification Definitions 2015)
Uncertain significance
(Jan 25, 2016)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot providednot providednot providedclinical testing

Details of each submission

From Eurofins Ntd Llc (ga), SCV000338988.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided1not providednot providednot provided

Last Updated: Apr 1, 2023