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NM_018191.4(RCBTB1):c.1164G>T (p.Leu388Phe) AND Retinitis pigmentosa

Germline classification:
Likely pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000239603.1

Allele description [Variation Report for NM_018191.4(RCBTB1):c.1164G>T (p.Leu388Phe)]

NM_018191.4(RCBTB1):c.1164G>T (p.Leu388Phe)

Gene:
RCBTB1:RCC1 and BTB domain containing protein 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
13q14.2
Genomic location:
Preferred name:
NM_018191.4(RCBTB1):c.1164G>T (p.Leu388Phe)
HGVS:
  • NC_000013.11:g.49544745C>A
  • NG_046892.1:g.45862G>T
  • NM_001352500.2:c.1164G>T
  • NM_001352501.2:c.1164G>T
  • NM_001352502.2:c.1164G>T
  • NM_001352503.2:c.1164G>T
  • NM_001352504.2:c.1164G>T
  • NM_001352506.2:c.585G>T
  • NM_018191.4:c.1164G>TMANE SELECT
  • NP_001339429.1:p.Leu388Phe
  • NP_001339430.1:p.Leu388Phe
  • NP_001339431.1:p.Leu388Phe
  • NP_001339432.1:p.Leu388Phe
  • NP_001339433.1:p.Leu388Phe
  • NP_001339435.1:p.Leu195Phe
  • NP_060661.3:p.Leu388Phe
  • NC_000013.10:g.50118881C>A
  • NM_018191.3:c.1164G>T
  • NR_148015.2:n.1558G>T
  • NR_148016.2:n.1514G>T
Protein change:
L195F; LEU388PHE
Links:
OMIM: 607867.0004; dbSNP: rs879255547
NCBI 1000 Genomes Browser:
rs879255547
Molecular consequence:
  • NM_001352500.2:c.1164G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352501.2:c.1164G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352502.2:c.1164G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352503.2:c.1164G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352504.2:c.1164G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001352506.2:c.585G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_018191.4:c.1164G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_148015.2:n.1558G>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_148016.2:n.1514G>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Retinitis pigmentosa (RP)
Synonyms:
Tapetoretinal degeneration
Identifiers:
MONDO: MONDO:0019200; MeSH: D012174; MedGen: C0035334; Orphanet: 791; OMIM: 268000; OMIM: PS268000

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000292421Center for Medical Genetics Ghent, University of Ghent
no assertion criteria provided
Likely pathogenicgermlineresearch

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedresearch

Citations

PubMed

Isolated and Syndromic Retinal Dystrophy Caused by Biallelic Mutations in RCBTB1, a Gene Implicated in Ubiquitination.

Coppieters F, Ascari G, Dannhausen K, Nikopoulos K, Peelman F, Karlstetter M, Xu M, Brachet C, Meunier I, Tsilimbaris MK, Tsika C, Blazaki SV, Vergult S, Farinelli P, Van Laethem T, Bauwens M, De Bruyne M, Chen R, Langmann T, Sui R, Meire F, Rivolta C, et al.

Am J Hum Genet. 2016 Aug 4;99(2):470-80. doi: 10.1016/j.ajhg.2016.06.017.

PubMed [citation]
PMID:
27486781
PMCID:
PMC4974088

Details of each submission

From Center for Medical Genetics Ghent, University of Ghent, SCV000292421.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearch PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jul 8, 2022