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NM_000527.5(LDLR):c.1214A>C (p.Asn405Thr) AND Hypercholesterolemia, familial, 1

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 25, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000237836.1

Allele description [Variation Report for NM_000527.5(LDLR):c.1214A>C (p.Asn405Thr)]

NM_000527.5(LDLR):c.1214A>C (p.Asn405Thr)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.1214A>C (p.Asn405Thr)
HGVS:
  • NC_000019.10:g.11113305A>C
  • NG_009060.1:g.28925A>C
  • NM_000527.5:c.1214A>CMANE SELECT
  • NM_001195798.2:c.1214A>C
  • NM_001195799.2:c.1091A>C
  • NM_001195800.2:c.710A>C
  • NM_001195803.2:c.833A>C
  • NP_000518.1:p.Asn405Thr
  • NP_001182727.1:p.Asn405Thr
  • NP_001182728.1:p.Asn364Thr
  • NP_001182729.1:p.Asn237Thr
  • NP_001182732.1:p.Asn278Thr
  • LRG_274:g.28925A>C
  • NC_000019.9:g.11223981A>C
  • c.1214A>C
Protein change:
N237T
Links:
LDLR-LOVD, British Heart Foundation: LDLR_001378; dbSNP: rs879254836
NCBI 1000 Genomes Browser:
rs879254836
Molecular consequence:
  • NM_000527.5:c.1214A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.1214A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.1091A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195800.2:c.710A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195803.2:c.833A>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Hypercholesterolemia, familial, 1
Synonyms:
LDL RECEPTOR DISORDER; Hyperlipoproteinemia Type IIa; HYPER-LOW-DENSITY-LIPOPROTEINEMIA; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0007750; MedGen: C0745103; Orphanet: 391665; OMIM: 143890

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000295303LDLR-LOVD, British Heart Foundation
criteria provided, single submitter

(ACGS Guidelines, 2013)
Uncertain significance
(Mar 25, 2016)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot provided1not providedliterature only

Citations

PubMed

Novel and recurrent LDLR gene mutations in Pakistani hypercholesterolemia patients.

Ahmed W, Ajmal M, Sadeque A, Whittall RA, Rafiq S, Putt W, Khawaja A, Imtiaz F, Ahmed N, Azam M, Humphries SE, Qamar R.

Mol Biol Rep. 2012 Jul;39(7):7365-72. doi: 10.1007/s11033-012-1568-1. Epub 2012 Feb 7.

PubMed [citation]
PMID:
22311046

Details of each submission

From LDLR-LOVD, British Heart Foundation, SCV000295303.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedliterature only PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Aug 5, 2023