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NM_000527.5(LDLR):c.464G>T (p.Cys155Phe) AND Hypercholesterolemia, familial, 1

Germline classification:
Likely pathogenic (2 submissions)
Last evaluated:
Mar 25, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000237311.3

Allele description [Variation Report for NM_000527.5(LDLR):c.464G>T (p.Cys155Phe)]

NM_000527.5(LDLR):c.464G>T (p.Cys155Phe)

Gene:
LDLR:low density lipoprotein receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19p13.2
Genomic location:
Preferred name:
NM_000527.5(LDLR):c.464G>T (p.Cys155Phe)
HGVS:
  • NC_000019.10:g.11105370G>T
  • NG_009060.1:g.20990G>T
  • NM_000527.5:c.464G>TMANE SELECT
  • NM_001195798.2:c.464G>T
  • NM_001195799.2:c.341G>T
  • NM_001195800.2:c.314-2022G>T
  • NM_001195803.2:c.314-1195G>T
  • NP_000518.1:p.Cys155Phe
  • NP_000518.1:p.Cys155Phe
  • NP_001182727.1:p.Cys155Phe
  • NP_001182728.1:p.Cys114Phe
  • LRG_274t1:c.464G>T
  • LRG_274:g.20990G>T
  • LRG_274p1:p.Cys155Phe
  • NC_000019.9:g.11216046G>T
  • NM_000527.4:c.464G>T
  • c.464G>T
Protein change:
C114F
Links:
LDLR-LOVD, British Heart Foundation: LDLR_000061; dbSNP: rs879254536
NCBI 1000 Genomes Browser:
rs879254536
Molecular consequence:
  • NM_001195800.2:c.314-2022G>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001195803.2:c.314-1195G>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000527.5:c.464G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195798.2:c.464G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001195799.2:c.341G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Hypercholesterolemia, familial, 1
Synonyms:
LDL RECEPTOR DISORDER; Hyperlipoproteinemia Type IIa; HYPER-LOW-DENSITY-LIPOPROTEINEMIA; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0007750; MedGen: C0745103; Orphanet: 391665; OMIM: 143890

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000294728LDLR-LOVD, British Heart Foundation
criteria provided, single submitter

(ACGS Guidelines, 2013)
Likely pathogenic
(Mar 25, 2016)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Citation Link,

SCV000606128Laboratorium voor Moleculaire Diagnostiek Experimentele Vasculaire Geneeskunde, Academisch Medisch Centrum
no assertion criteria provided
Pathogenicgermlineresearch

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot provided1not providedliterature only
not providedgermlineunknownnot providednot providednot providednot providednot providedresearch

Citations

PubMed

Molecular basis of autosomal dominant hypercholesterolemia: assessment in a large cohort of hypercholesterolemic children.

van der Graaf A, Avis HJ, Kusters DM, Vissers MN, Hutten BA, Defesche JC, Huijgen R, Fouchier SW, Wijburg FA, Kastelein JJ, Wiegman A.

Circulation. 2011 Mar 22;123(11):1167-73. doi: 10.1161/CIRCULATIONAHA.110.979450. Epub 2011 Mar 7.

PubMed [citation]
PMID:
21382890

Details of each submission

From LDLR-LOVD, British Heart Foundation, SCV000294728.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedliterature only PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

From Laboratorium voor Moleculaire Diagnostiek Experimentele Vasculaire Geneeskunde, Academisch Medisch Centrum, SCV000606128.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearchnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 1, 2024