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NM_000371.4(TTR):c.136A>G (p.Ile46Val) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Oct 26, 2017
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000235774.3

Allele description [Variation Report for NM_000371.4(TTR):c.136A>G (p.Ile46Val)]

NM_000371.4(TTR):c.136A>G (p.Ile46Val)

Gene:
TTR:transthyretin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
18q12.1
Genomic location:
Preferred name:
NM_000371.4(TTR):c.136A>G (p.Ile46Val)
HGVS:
  • NC_000018.10:g.31592962A>G
  • NG_009490.1:g.6196A>G
  • NM_000371.4:c.136A>GMANE SELECT
  • NP_000362.1:p.Ile46Val
  • NP_000362.1:p.Ile46Val
  • LRG_416t1:c.136A>G
  • LRG_416:g.6196A>G
  • LRG_416p1:p.Ile46Val
  • NC_000018.9:g.29172925A>G
  • NM_000371.3:c.136A>G
Protein change:
I46V
Links:
dbSNP: rs773584864
NCBI 1000 Genomes Browser:
rs773584864
Molecular consequence:
  • NM_000371.4:c.136A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000293654GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(Oct 26, 2017)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000293654.10

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The I46V variant has not been published as pathogenic or been reported as a benign variant to our knowledge. The I46V variant is a conservative amino acid substitution, which is not likely to impact secondary protein structure as these residues share similar properties. This substitution occurs at a position that is not conserved. In silico analysis predicts this variant likely does not alter the protein structure/function. However, the I46V variant was not observed in approximately 6500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. Although not in any known functional domain, missense variants in nearby residues (S43N, R44S, A45S, A45T, V48M) have been reported in the Human Gene Mutation Database in association with amyloidosis (Stenson et al., 2014).Therefore, based on the currently available information, it is unclear whether this variant is pathogenic or rare benign

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024