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NM_002834.5(PTPN11):c.272A>G (p.Lys91Arg) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Sep 29, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000210044.2

Allele description [Variation Report for NM_002834.5(PTPN11):c.272A>G (p.Lys91Arg)]

NM_002834.5(PTPN11):c.272A>G (p.Lys91Arg)

Gene:
PTPN11:protein tyrosine phosphatase non-receptor type 11 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
12q24.13
Genomic location:
Preferred name:
NM_002834.5(PTPN11):c.272A>G (p.Lys91Arg)
HGVS:
  • NC_000012.12:g.112450452A>G
  • NG_007459.1:g.36721A>G
  • NM_001330437.2:c.272A>G
  • NM_001374625.1:c.269A>G
  • NM_002834.5:c.272A>GMANE SELECT
  • NM_080601.3:c.272A>G
  • NP_001317366.1:p.Lys91Arg
  • NP_001361554.1:p.Lys90Arg
  • NP_002825.3:p.Lys91Arg
  • NP_542168.1:p.Lys91Arg
  • LRG_614t1:c.272A>G
  • LRG_614:g.36721A>G
  • NC_000012.11:g.112888256A>G
  • NM_002834.3:c.272A>G
Protein change:
K90R
Links:
dbSNP: rs869312744
NCBI 1000 Genomes Browser:
rs869312744
Molecular consequence:
  • NM_001330437.2:c.272A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374625.1:c.269A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_002834.5:c.272A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_080601.3:c.272A>G - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000265843Molecular Diagnostics Lab, Nemours Children's Health, Delaware
criteria provided, single submitter

(ACMG Guidelines, 2015)
Uncertain significance
(Sep 29, 2015)
unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]
PMID:
25741868
PMCID:
PMC4544753

Details of each submission

From Molecular Diagnostics Lab, Nemours Children's Health, Delaware, SCV000265843.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Feb 18, 2023