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NM_000551.4(VHL):c.419_420del (p.Leu140fs) AND Von Hippel-Lindau syndrome

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Feb 26, 2016
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000208805.1

Allele description [Variation Report for NM_000551.4(VHL):c.419_420del (p.Leu140fs)]

NM_000551.4(VHL):c.419_420del (p.Leu140fs)

Genes:
LOC107303340:3p25 von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase Alu-mediated recombination region [Gene]
VHL:von Hippel-Lindau tumor suppressor [Gene - OMIM - HGNC]
Variant type:
Microsatellite
Cytogenetic location:
3p25.3
Genomic location:
Preferred name:
NM_000551.4(VHL):c.419_420del (p.Leu140fs)
HGVS:
  • NC_000003.12:g.10146588TC[2]
  • NG_008212.3:g.9954TC[2]
  • NG_046756.1:g.4350TC[2]
  • NM_000551.4:c.419_420delMANE SELECT
  • NM_001354723.2:c.*18-3199TC[2]
  • NM_198156.3:c.341-3199TC[2]
  • NP_000542.1:p.Leu140fs
  • LRG_322:g.9954TC[2]
  • NC_000003.11:g.10188272TC[2]
  • NC_000003.11:g.10188272_10188273del
  • NM_000551.3:c.419_420delTC
  • p.[Leu140Glnfs*3]
Protein change:
L140fs
Links:
dbSNP: rs869025649
NCBI 1000 Genomes Browser:
rs869025649
Molecular consequence:
  • NM_000551.4:c.419_420del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001354723.2:c.*18-3199TC[2] - intron variant - [Sequence Ontology: SO:0001627]
  • NM_198156.3:c.341-3199TC[2] - intron variant - [Sequence Ontology: SO:0001627]
Observations:
6

Condition(s)

Name:
Von Hippel-Lindau syndrome (VHLS)
Synonyms:
VHL syndrome; Von Hippel-Lindau
Identifiers:
MONDO: MONDO:0008667; MedGen: C0019562; Orphanet: 892; OMIM: 193300

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000264733Genomic Diagnostic Laboratory, Division of Genomic Diagnostics, Children's Hospital of Philadelphia
no assertion criteria provided
Pathogenic
(Feb 26, 2016)
germlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes6not providednot providednot providednot providedclinical testing

Details of each submission

From Genomic Diagnostic Laboratory, Division of Genomic Diagnostics, Children's Hospital of Philadelphia, SCV000264733.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided6not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided6not providednot providednot provided

Last Updated: Sep 29, 2024