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NM_000219.6(KCNE1):c.29C>T (p.Thr10Met) AND not specified

Germline classification:
Likely benign (1 submission)
Last evaluated:
Feb 9, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000208391.3

Allele description [Variation Report for NM_000219.6(KCNE1):c.29C>T (p.Thr10Met)]

NM_000219.6(KCNE1):c.29C>T (p.Thr10Met)

Gene:
KCNE1:potassium voltage-gated channel subfamily E regulatory subunit 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
21q22.12
Genomic location:
Preferred name:
NM_000219.6(KCNE1):c.29C>T (p.Thr10Met)
HGVS:
  • NC_000021.9:g.34449606G>A
  • NG_009091.1:g.66710C>T
  • NM_000219.6:c.29C>TMANE SELECT
  • NM_001127668.4:c.29C>T
  • NM_001127669.4:c.29C>T
  • NM_001127670.4:c.29C>T
  • NM_001270402.3:c.29C>T
  • NM_001270403.2:c.29C>T
  • NM_001270404.3:c.29C>T
  • NM_001270405.3:c.29C>T
  • NP_000210.2:p.Thr10Met
  • NP_001121140.1:p.Thr10Met
  • NP_001121141.1:p.Thr10Met
  • NP_001121142.1:p.Thr10Met
  • NP_001257331.1:p.Thr10Met
  • NP_001257332.1:p.Thr10Met
  • NP_001257333.1:p.Thr10Met
  • NP_001257334.1:p.Thr10Met
  • LRG_290t1:c.29C>T
  • LRG_290:g.66710C>T
  • NC_000021.8:g.35821904G>A
  • NM_000219.3:c.29C>T
  • NM_000219.4:c.29C>T
  • NM_000219.5:c.29C>T
  • NM_001270402.1:c.29C>T
  • P15382:p.Thr10Met
Protein change:
T10M
Links:
UniProtKB: P15382#VAR_074909; dbSNP: rs144917638
NCBI 1000 Genomes Browser:
rs144917638
Molecular consequence:
  • NM_000219.6:c.29C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127668.4:c.29C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127669.4:c.29C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127670.4:c.29C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270402.3:c.29C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270403.2:c.29C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270404.3:c.29C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001270405.3:c.29C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000263970Blueprint Genetics
criteria provided, single submitter

(Variant Classification)
Likely benign
(Feb 9, 2015)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Spectrum and prevalence of mutations from the first 2,500 consecutive unrelated patients referred for the FAMILION long QT syndrome genetic test.

Kapplinger JD, Tester DJ, Salisbury BA, Carr JL, Harris-Kerr C, Pollevick GD, Wilde AA, Ackerman MJ.

Heart Rhythm. 2009 Sep;6(9):1297-303. doi: 10.1016/j.hrthm.2009.05.021. Epub 2009 Jun 23.

PubMed [citation]
PMID:
19716085
PMCID:
PMC3049907

Details of each submission

From Blueprint Genetics, SCV000263970.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing
(GTR000519267.4)
PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided
(GTR000519267.4)
1not providednot providednot provided

Last Updated: May 7, 2024