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NM_000238.4(KCNH2):c.2320G>T (p.Asp774Tyr) AND Long QT syndrome 2

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Apr 20, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000208316.3

Allele description [Variation Report for NM_000238.4(KCNH2):c.2320G>T (p.Asp774Tyr)]

NM_000238.4(KCNH2):c.2320G>T (p.Asp774Tyr)

Gene:
KCNH2:potassium voltage-gated channel subfamily H member 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7q36.1
Genomic location:
Preferred name:
NM_000238.4(KCNH2):c.2320G>T (p.Asp774Tyr)
Other names:
p.D774Y:GAC>TAC
HGVS:
  • NC_000007.14:g.150950246C>A
  • NG_008916.1:g.32681G>T
  • NM_000238.4:c.2320G>TMANE SELECT
  • NM_001204798.2:c.1300G>T
  • NM_001406753.1:c.2032G>T
  • NM_001406755.1:c.2143G>T
  • NM_001406756.1:c.2032G>T
  • NM_001406757.1:c.2020G>T
  • NM_172056.3:c.2320G>T
  • NM_172057.3:c.1300G>T
  • NP_000229.1:p.Asp774Tyr
  • NP_000229.1:p.Asp774Tyr
  • NP_001191727.1:p.Asp434Tyr
  • NP_001393682.1:p.Asp678Tyr
  • NP_001393684.1:p.Asp715Tyr
  • NP_001393685.1:p.Asp678Tyr
  • NP_001393686.1:p.Asp674Tyr
  • NP_742053.1:p.Asp774Tyr
  • NP_742053.1:p.Asp774Tyr
  • NP_742054.1:p.Asp434Tyr
  • NP_742054.1:p.Asp434Tyr
  • LRG_288t1:c.2320G>T
  • LRG_288t2:c.2320G>T
  • LRG_288t3:c.1300G>T
  • LRG_288:g.32681G>T
  • LRG_288p1:p.Asp774Tyr
  • LRG_288p2:p.Asp774Tyr
  • LRG_288p3:p.Asp434Tyr
  • NC_000007.13:g.150647334C>A
  • NM_000238.2:c.2320G>T
  • NM_000238.3:c.2320G>T
  • NM_172056.2:c.2320G>T
  • NM_172057.2:c.1300G>T
  • NR_176254.1:n.2728G>T
  • NR_176255.1:n.1601G>T
  • Q12809:p.Asp774Tyr
Protein change:
D434Y
Links:
UniProtKB: Q12809#VAR_068277; dbSNP: rs199472995
NCBI 1000 Genomes Browser:
rs199472995
Molecular consequence:
  • NM_000238.4:c.2320G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001204798.2:c.1300G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406753.1:c.2032G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406755.1:c.2143G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406756.1:c.2032G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406757.1:c.2020G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_172056.3:c.2320G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_172057.3:c.1300G>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Long QT syndrome 2 (LQT2)
Identifiers:
MONDO: MONDO:0013367; MedGen: C3150943; Orphanet: 101016; Orphanet: 768; OMIM: 613688

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000263981Blueprint Genetics
criteria provided, single submitter

(Variant Classification)
Pathogenic
(Apr 20, 2015)
germlineclinical testing

PubMed (4)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot providednot providednot providedclinical testing

Citations

PubMed

Compendium of cardiac channel mutations in 541 consecutive unrelated patients referred for long QT syndrome genetic testing.

Tester DJ, Will ML, Haglund CM, Ackerman MJ.

Heart Rhythm. 2005 May;2(5):507-17.

PubMed [citation]
PMID:
15840476

Long QT and Brugada syndrome gene mutations in New Zealand.

Chung SK, MacCormick JM, McCulley CH, Crawford J, Eddy CA, Mitchell EA, Shelling AN, French JK, Skinner JR, Rees MI.

Heart Rhythm. 2007 Oct;4(10):1306-14. Epub 2007 Jul 14.

PubMed [citation]
PMID:
17905336
See all PubMed Citations (4)

Details of each submission

From Blueprint Genetics, SCV000263981.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (4)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided1not providednot providednot provided

Last Updated: Sep 29, 2024