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NM_153704.6(TMEM67):c.1321C>T (p.Arg441Cys) AND Joubert syndrome 6

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Feb 23, 2015
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000201784.1

Allele description [Variation Report for NM_153704.6(TMEM67):c.1321C>T (p.Arg441Cys)]

NM_153704.6(TMEM67):c.1321C>T (p.Arg441Cys)

Gene:
TMEM67:transmembrane protein 67 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
8q22.1
Genomic location:
Preferred name:
NM_153704.6(TMEM67):c.1321C>T (p.Arg441Cys)
HGVS:
  • NC_000008.11:g.93786255C>T
  • NG_009190.1:g.36412C>T
  • NM_001142301.1:c.1078C>T
  • NM_153704.6:c.1321C>TMANE SELECT
  • NP_001135773.1:p.Arg360Cys
  • NP_714915.3:p.Arg441Cys
  • NP_714915.3:p.Arg441Cys
  • LRG_688t1:c.1321C>T
  • LRG_688t2:c.1078C>T
  • LRG_688:g.36412C>T
  • LRG_688p1:p.Arg441Cys
  • LRG_688p2:p.Arg360Cys
  • NC_000008.10:g.94798483C>T
  • NM_153704.5:c.1321C>T
  • NR_024522.2:n.1342C>T
  • Q5HYA8:p.Arg441Cys
Protein change:
R360C
Links:
UniProtKB: Q5HYA8#VAR_063794; dbSNP: rs752362727
NCBI 1000 Genomes Browser:
rs752362727
Molecular consequence:
  • NM_001142301.1:c.1078C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_153704.6:c.1321C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_024522.2:n.1342C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Joubert syndrome 6 (JBTS6)
Identifiers:
MONDO: MONDO:0012539; MedGen: C1853153; Orphanet: 475; OMIM: 610688

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000256517UW Hindbrain Malformation Research Program, University of Washington

See additional submitters

criteria provided, single submitter

(Bachmann-Gagescu et al. (J Med Genet. 2015))
Pathogenic
(Feb 23, 2015)
unknownresearch

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyesnot providednot providednot providednot providednot providedresearch

Citations

PubMed

Joubert syndrome: a model for untangling recessive disorders with extreme genetic heterogeneity.

Bachmann-Gagescu R, Dempsey JC, Phelps IG, O'Roak BJ, Knutzen DM, Rue TC, Ishak GE, Isabella CR, Gorden N, Adkins J, Boyle EA, de Lacy N, O'Day D, Alswaid A, Ramadevi A R, Lingappa L, Lourenço C, Martorell L, Garcia-Cazorla À, Ozyürek H, Haliloğlu G, Tuysuz B, et al.

J Med Genet. 2015 Aug;52(8):514-22. doi: 10.1136/jmedgenet-2015-103087. Epub 2015 Jun 19.

PubMed [citation]
PMID:
26092869
PMCID:
PMC5082428

Details of each submission

From UW Hindbrain Malformation Research Program, University of Washington, SCV000256517.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedresearch PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 8, 2024