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NM_000218.3(KCNQ1):c.752T>C (p.Leu251Pro) AND not provided

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jun 23, 2014
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000182106.2

Allele description [Variation Report for NM_000218.3(KCNQ1):c.752T>C (p.Leu251Pro)]

NM_000218.3(KCNQ1):c.752T>C (p.Leu251Pro)

Gene:
KCNQ1:potassium voltage-gated channel subfamily Q member 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11p15.5
Genomic location:
Preferred name:
NM_000218.3(KCNQ1):c.752T>C (p.Leu251Pro)
Other names:
p.L251P:CTG>CCG
HGVS:
  • NC_000011.10:g.2572081T>C
  • NG_008935.1:g.132091T>C
  • NM_000218.3:c.752T>CMANE SELECT
  • NM_001406836.1:c.752T>C
  • NM_001406837.1:c.482T>C
  • NM_181798.2:c.371T>C
  • NP_000209.2:p.Leu251Pro
  • NP_000209.2:p.Leu251Pro
  • NP_001393765.1:p.Leu251Pro
  • NP_001393766.1:p.Leu161Pro
  • NP_861463.1:p.Leu124Pro
  • NP_861463.1:p.Leu124Pro
  • LRG_287t1:c.752T>C
  • LRG_287t2:c.371T>C
  • LRG_287:g.132091T>C
  • LRG_287p1:p.Leu251Pro
  • LRG_287p2:p.Leu124Pro
  • NC_000011.9:g.2593311T>C
  • NM_000218.2:c.752T>C
  • NM_181798.1:c.371T>C
  • NR_040711.2:n.645T>C
Protein change:
L124P
Links:
dbSNP: rs199472716
NCBI 1000 Genomes Browser:
rs199472716
Molecular consequence:
  • NM_000218.3:c.752T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406836.1:c.752T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001406837.1:c.482T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_181798.2:c.371T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000234409GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Pathogenic
(Jun 23, 2014)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000234409.10

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

p.Leu251Pro (CTG>CCG): c.752 T>C in exon 5 of the KCNQ1 gene (NM_000218.2). The L251P mutation in the KCNQ1 gene has been reported in one Canadian family with three affected family members with ECG abnormalities consistent with LQTS (Krahn AD et al., 2000; Deschenes D et al., 2003). Krahn et al., 2000, identified the L251P mutation (reported at L122P in the LVKQT1 gene due to different nomenclature) in this family, which was absent from 668 normal controls (1336 alleles) of 6 different ethnic backgrounds. Deschenes D et al., 2003, studied this same Canadian family and showed that co-expressing the regulatory subunit of KCNQ1 (KCNE1) with equal amounts of wild type and L251P mutant DNA results in an 11-fold reduction in the amplitude of potassium currents in cells. This suggest that the P251L mutation creates a dominant negative effect on the KCNQ1 channel, resulting in the ECG abnormalities seen in this family (Deschenes D et al., 2003). Moreover, mutations in nearby residues (V241G, W248H, L250H, V254M, H258N) have been reported in association with LQTS, further supporting the functional importance of this region of the protein. Furthermore, the L251P mutation was not observed inapproximately 6,500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. In summary, L251P in the KCNQ1 gene is interpreted as a disease-causing mutation. The variant is found in LQT panel(s).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024