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NM_000257.4(MYH7):c.3172G>T (p.Asp1058Tyr) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jul 24, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000158595.2

Allele description [Variation Report for NM_000257.4(MYH7):c.3172G>T (p.Asp1058Tyr)]

NM_000257.4(MYH7):c.3172G>T (p.Asp1058Tyr)

Gene:
MYH7:myosin heavy chain 7 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
14q11.2
Genomic location:
Preferred name:
NM_000257.4(MYH7):c.3172G>T (p.Asp1058Tyr)
Other names:
p.D1058Y:GAC>TAC
HGVS:
  • NC_000014.9:g.23422253C>A
  • NG_007884.1:g.18409G>T
  • NM_000257.4:c.3172G>TMANE SELECT
  • NP_000248.2:p.Asp1058Tyr
  • LRG_384t1:c.3172G>T
  • LRG_384:g.18409G>T
  • NC_000014.8:g.23891462C>A
  • NM_000257.2:c.3172G>T
Protein change:
D1058Y
Links:
dbSNP: rs730880770
NCBI 1000 Genomes Browser:
rs730880770
Molecular consequence:
  • NM_000257.4:c.3172G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000208530GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(Jul 24, 2018)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000208530.11

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The D1058Y variant has not been published as a pathogenic variant, nor has it been reported as a benign polymorphism to our knowledge. The D1058Y variant was not observed in approximately 6,500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. The D1058Y variant is a semi-conservative amino acid substitution, which may impact secondary protein structure as these residues differ in some properties. Additionally, this substitution occurs at a position that is conserved across species and in silico analysis predicts this variant is probably damaging to the protein structure/function. Furthermore, missense variants in nearby residues (R1053Q, E1056D, G1057S, G1057D) have been reported in association with cardiomyopathy, supporting the functional importance of this region of the protein. Therefore, based on the currently available information, it is unclear whether this variant is a pathogenic variant or a rare benign variant.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024