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NM_016203.4(PRKAG2):c.1030C>T (p.His344Tyr) AND Hypertrophic cardiomyopathy

Germline classification:
Likely pathogenic (1 submission)
Last evaluated:
Feb 8, 2013
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000154556.5

Allele description [Variation Report for NM_016203.4(PRKAG2):c.1030C>T (p.His344Tyr)]

NM_016203.4(PRKAG2):c.1030C>T (p.His344Tyr)

Gene:
PRKAG2:protein kinase AMP-activated non-catalytic subunit gamma 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
7q36.1
Genomic location:
Preferred name:
NM_016203.4(PRKAG2):c.1030C>T (p.His344Tyr)
HGVS:
  • NC_000007.14:g.151572685G>A
  • NG_007486.1:g.309546C>T
  • NG_007486.2:g.309547C>T
  • NM_001040633.2:c.898C>T
  • NM_001304527.2:c.655C>T
  • NM_001304531.2:c.307C>T
  • NM_001363698.2:c.658C>T
  • NM_016203.4:c.1030C>TMANE SELECT
  • NM_024429.2:c.307C>T
  • NP_001035723.1:p.His300Tyr
  • NP_001291456.1:p.His219Tyr
  • NP_001291460.1:p.His103Tyr
  • NP_001350627.1:p.His220Tyr
  • NP_057287.2:p.His344Tyr
  • NP_077747.1:p.His103Tyr
  • LRG_430t1:c.1030C>T
  • LRG_430:g.309547C>T
  • LRG_430p1:p.His344Tyr
  • NC_000007.13:g.151269771G>A
  • NM_016203.3:c.1030C>T
Protein change:
H103Y
Links:
dbSNP: rs727504392
NCBI 1000 Genomes Browser:
rs727504392
Molecular consequence:
  • NM_001040633.2:c.898C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001304527.2:c.655C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001304531.2:c.307C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001363698.2:c.658C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_016203.4:c.1030C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_024429.2:c.307C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Hypertrophic cardiomyopathy
Synonyms:
HYPERTROPHIC MYOCARDIOPATHY
Identifiers:
MONDO: MONDO:0005045; MeSH: D002312; MedGen: C0007194; Human Phenotype Ontology: HP:0001639

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000204229Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine
criteria provided, single submitter

(LMM Criteria)
Likely pathogenic
(Feb 8, 2013)
germlineclinical testing

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot provided11not providednot providednot providedclinical testing

Citations

PubMed

A systematic approach to assessing the clinical significance of genetic variants.

Duzkale H, Shen J, McLaughlin H, Alfares A, Kelly MA, Pugh TJ, Funke BH, Rehm HL, Lebo MS.

Clin Genet. 2013 Nov;84(5):453-63. doi: 10.1111/cge.12257.

PubMed [citation]
PMID:
24033266
PMCID:
PMC3995020

Details of each submission

From Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine, SCV000204229.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testing PubMed (1)

Description

proposed classification - variant undergoing re-assessment, contact laboratory

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot provided1not provided1not provided

Last Updated: Dec 24, 2022