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NM_152515.5(CKAP2L):c.571dup (p.Ile191fs) AND Filippi syndrome

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Nov 6, 2014
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000149779.3

Allele description [Variation Report for NM_152515.5(CKAP2L):c.571dup (p.Ile191fs)]

NM_152515.5(CKAP2L):c.571dup (p.Ile191fs)

Gene:
CKAP2L:cytoskeleton associated protein 2 like [Gene - OMIM - HGNC]
Variant type:
Duplication
Cytogenetic location:
2q14.1
Genomic location:
Preferred name:
NM_152515.5(CKAP2L):c.571dup (p.Ile191fs)
HGVS:
  • NC_000002.12:g.112756800dup
  • NG_041820.1:g.12878dup
  • NM_001304361.2:c.76dup
  • NM_152515.5:c.571dupMANE SELECT
  • NP_001291290.1:p.Ile26fs
  • NP_689728.3:p.Ile191fs
  • NC_000002.11:g.113514377dup
  • NM_152515.4:c.571dup
Protein change:
I191fs
Links:
OMIM: 616174.0001; dbSNP: rs727502802
NCBI 1000 Genomes Browser:
rs727502802
Molecular consequence:
  • NM_001304361.2:c.76dup - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_152515.5:c.571dup - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Filippi syndrome (FLPIS)
Identifiers:
MONDO: MONDO:0010092; MedGen: C0795940; Orphanet: 3255; OMIM: 272440

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000196592OMIM
no assertion criteria provided
Pathogenic
(Nov 6, 2014)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Filippi syndrome: further clinical characterization.

Battaglia A, Filippi T, Pusceddu S, Williams CA.

Am J Med Genet A. 2008 Jul 15;146A(14):1848-52. doi: 10.1002/ajmg.a.32400. Review.

PubMed [citation]
PMID:
18553552

Mutations in CKAP2L, the human homolog of the mouse Radmis gene, cause Filippi syndrome.

Hussain MS, Battaglia A, Szczepanski S, Kaygusuz E, Toliat MR, Sakakibara S, Altmüller J, Thiele H, Nürnberg G, Moosa S, Yigit G, Beleggia F, Tinschert S, Clayton-Smith J, Vasudevan P, Urquhart JE, Donnai D, Fryer A, Percin F, Brancati F, Dobbie A, Smigiel R, et al.

Am J Hum Genet. 2014 Nov 6;95(5):622-32. doi: 10.1016/j.ajhg.2014.10.008. Epub 2014 Nov 6.

PubMed [citation]
PMID:
25439729
PMCID:
PMC4225581

Details of each submission

From OMIM, SCV000196592.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

In 2 affected brothers from a Sardinian family with Filippi syndrome (FLPIS; 272440), originally described by Battaglia et al. (2008), Hussain et al. (2014) identified homozygosity for a 1-bp duplication (c.571dupA) in exon 4 of the CKAP2L gene, causing a frameshift predicted to result in a premature termination codon (Ile191ASnfsTer6). The unaffected parents were heterozygous for the mutation, which was not found in more than 1,600 exomes from an in-house database or in the dbSNP, 1000 Genomes Project, or Exome Variant Server databases. Functional analysis in patient lymphoblastoid cell lines (LCLs) demonstrated that in contrast to wildtype CKAP2L, the 571dupA mutant was absent from microtubules at the spindle pole in dividing cells in metaphase and telophase. Confocal microscopy of LCLs revealed severe cellular defects, including disorganized mitotic spindles that appeared to be shorter than normal, a long chromatin bridge between daughter nuclei, and supernumerary centrosomes. These abnormalities, present in 25 to 30% of mutant cells, were only seen in 5 to 6% of wildtype cells.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Apr 23, 2022