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NM_001323289.2(CDKL5):c.1708G>T (p.Glu570Ter) AND Atypical Rett syndrome

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 13, 2014
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000133329.3

Allele description [Variation Report for NM_001323289.2(CDKL5):c.1708G>T (p.Glu570Ter)]

NM_001323289.2(CDKL5):c.1708G>T (p.Glu570Ter)

Gene:
CDKL5:cyclin dependent kinase like 5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp22.13
Genomic location:
Preferred name:
NM_001323289.2(CDKL5):c.1708G>T (p.Glu570Ter)
Other names:
NM_001323289.2(CDKL5):c.1708G>T; p.Glu570Ter
HGVS:
  • NC_000023.11:g.18604632G>T
  • NG_008475.1:g.184028G>T
  • NM_001037343.2:c.1708G>T
  • NM_001323289.2:c.1708G>TMANE SELECT
  • NM_003159.3:c.1708G>T
  • NP_001032420.1:p.Glu570Ter
  • NP_001310218.1:p.Glu570Ter
  • NP_003150.1:p.Glu570Ter
  • NP_003150.1:p.Glu570Ter
  • NC_000023.10:g.18622752G>T
  • NM_003159.2:c.1708G>T
Protein change:
E570*
Links:
RettBASE (CDKL5): 129; dbSNP: rs267608644
NCBI 1000 Genomes Browser:
rs267608644
Molecular consequence:
  • NM_001037343.2:c.1708G>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_001323289.2:c.1708G>T - nonsense - [Sequence Ontology: SO:0001587]
  • NM_003159.3:c.1708G>T - nonsense - [Sequence Ontology: SO:0001587]

Condition(s)

Name:
Atypical Rett syndrome
Synonyms:
Rett like syndrome
Identifiers:
MONDO: MONDO:0017746; MedGen: C2748910

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000188338RettBASE
no assertion criteria provided
Pathogenic
(Mar 13, 2014)
unknowncuration

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyes1not providednot provided1not providedcuration

Citations

PubMed

Analysis of Hungarian patients with Rett syndrome phenotype for MECP2, CDKL5 and FOXG1 gene mutations.

Hadzsiev K, Polgar N, Bene J, Komlosi K, Karteszi J, Hollody K, Kosztolanyi G, Renieri A, Melegh B.

J Hum Genet. 2011 Mar;56(3):183-7. doi: 10.1038/jhg.2010.156. Epub 2010 Dec 16.

PubMed [citation]
PMID:
21160487

Details of each submission

From RettBASE, SCV000188338.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedcuration PubMed (1)

Description

"Rett syndrome - early-onset seizures"
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyes1not providednot provided1not providednot providednot provided

Last Updated: Oct 8, 2024