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NM_001323289.2(CDKL5):c.1079del (p.Leu360fs) AND Developmental and epileptic encephalopathy, 2

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Mar 13, 2014
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000133314.3

Allele description [Variation Report for NM_001323289.2(CDKL5):c.1079del (p.Leu360fs)]

NM_001323289.2(CDKL5):c.1079del (p.Leu360fs)

Gene:
CDKL5:cyclin dependent kinase like 5 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
Xp22.13
Genomic location:
Preferred name:
NM_001323289.2(CDKL5):c.1079del (p.Leu360fs)
Other names:
NM_001323289.2(CDKL5):c.1079del; p.Leu360fs
HGVS:
  • NC_000023.11:g.18604003del
  • NG_008475.1:g.183399del
  • NM_001037343.2:c.1079del
  • NM_001323289.2:c.1079delMANE SELECT
  • NM_003159.3:c.1079del
  • NP_001032420.1:p.Leu360fs
  • NP_001310218.1:p.Leu360fs
  • NP_003150.1:p.Leu360fs
  • NC_000023.10:g.18622123del
  • NM_003159.2:c.1079delT
Protein change:
L360fs
Links:
RettBASE (CDKL5): 135; dbSNP: rs267608565
NCBI 1000 Genomes Browser:
rs267608565
Molecular consequence:
  • NM_001037343.2:c.1079del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001323289.2:c.1079del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_003159.3:c.1079del - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Developmental and epileptic encephalopathy, 2 (DEE2)
Synonyms:
INFANTILE SPASM SYNDROME, X-LINKED 2; Early infantile epileptic encephalopathy 2
Identifiers:
MONDO: MONDO:0010396; MedGen: C4750718; Orphanet: 1934; Orphanet: 3451; OMIM: 300672

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000188323RettBASE
no assertion criteria provided
Pathogenic
(Mar 13, 2014) 		unknowncuration

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownyes1not providednot provided1not providedcuration

Citations

PubMed

CDKL5 alterations lead to early epileptic encephalopathy in both genders.

Liang JS, Shimojima K, Takayama R, Natsume J, Shichiji M, Hirasawa K, Imai K, Okanishi T, Mizuno S, Okumura A, Sugawara M, Ito T, Ikeda H, Takahashi Y, Oguni H, Imai K, Osawa M, Yamamoto T.

Epilepsia. 2011 Oct;52(10):1835-42. doi: 10.1111/j.1528-1167.2011.03174.x. Epub 2011 Jul 19.

PubMed [citation]
PMID:
21770923

Details of each submission

From RettBASE, SCV000188323.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedcuration PubMed (1)

Description

"Not Rett syndrome - epileptic encephalopathy"

PubMed [ID: 21770923]

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownyes1not providednot provided1not providednot providednot provided

Last Updated: Oct 8, 2024