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NM_000179.3(MSH6):c.4054A>C (p.Lys1352Gln) AND Hereditary cancer-predisposing syndrome

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 20, 2013
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000131202.2

Allele description [Variation Report for NM_000179.3(MSH6):c.4054A>C (p.Lys1352Gln)]

NM_000179.3(MSH6):c.4054A>C (p.Lys1352Gln)

Gene:
MSH6:mutS homolog 6 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2p16.3
Genomic location:
Preferred name:
NM_000179.3(MSH6):c.4054A>C (p.Lys1352Gln)
HGVS:
  • NC_000002.12:g.47806831A>C
  • NG_007111.1:g.28685A>C
  • NG_008397.1:g.103845T>G
  • NM_000179.3:c.4054A>CMANE SELECT
  • NM_001281492.2:c.3664A>C
  • NM_001281493.2:c.3148A>C
  • NM_001281494.2:c.3148A>C
  • NP_000170.1:p.Lys1352Gln
  • NP_000170.1:p.Lys1352Gln
  • NP_001268421.1:p.Lys1222Gln
  • NP_001268422.1:p.Lys1050Gln
  • NP_001268423.1:p.Lys1050Gln
  • LRG_219t1:c.4054A>C
  • LRG_219:g.28685A>C
  • LRG_219p1:p.Lys1352Gln
  • NC_000002.11:g.48033970A>C
  • NM_000179.2:c.4054A>C
  • p.K1352Q
Protein change:
K1050Q
Links:
dbSNP: rs587782309
NCBI 1000 Genomes Browser:
rs587782309
Molecular consequence:
  • NM_000179.3:c.4054A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001281492.2:c.3664A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001281493.2:c.3148A>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001281494.2:c.3148A>C - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Hereditary cancer-predisposing syndrome
Synonyms:
Neoplastic Syndromes, Hereditary; Tumor predisposition; Cancer predisposition; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0015356; MeSH: D009386; MedGen: C0027672

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000186152Ambry Genetics
criteria provided, single submitter

(Ambry Autosomal Dominant and X-Linked criteria (10/2015))
Uncertain significance
(Mar 20, 2013)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown1not providednot provided1not providedclinical testing

Details of each submission

From Ambry Genetics, SCV000186152.6

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided

Description

There is insufficient or conflicting evidence for classification of this alteration.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknown1not providednot provided1not providednot providednot provided

Last Updated: Dec 24, 2023