NM_003289.4(TPM2):c.398G>C (p.Arg133Pro) AND not provided

Germline classification:: Uncertain significance (2 submissions)
Last evaluated:: Sep 2, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000128683.4

Allele description [Variation Report for NM_003289.4(TPM2):c.398G>C (p.Arg133Pro)]

NM_003289.4(TPM2):c.398G>C (p.Arg133Pro)

Gene:

TPM2:tropomyosin 2 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

9p13.3

Genomic location:

Preferred name:

NM_003289.4(TPM2):c.398G>C (p.Arg133Pro)

HGVS:

NC_000009.12:g.35685528C>G
NG_011620.1:g.9530G>C
NM_001301226.2:c.398G>C
NM_001301227.2:c.398G>C
NM_003289.4:c.398G>CMANE SELECT
NM_213674.1:c.398G>C
NP_001288155.1:p.Arg133Pro
NP_001288156.1:p.Arg133Pro
NP_003280.2:p.Arg133Pro
NP_003280.2:p.Arg133Pro
NP_998839.1:p.Arg133Pro
LRG_680t1:c.398G>C
LRG_680t2:c.398G>C
LRG_680:g.9530G>C
LRG_680p1:p.Arg133Pro
LRG_680p2:p.Arg133Pro
NC_000009.11:g.35685525C>G
NM_003289.3:c.398G>C
P07951:p.Arg133Pro
p.(Arg133Pro)

Protein change:

R133P

Links:

UniProtKB: P07951#VAR_071493; dbSNP: rs199476152

NCBI 1000 Genomes Browser:

rs199476152

Molecular consequence:

NM_001301226.2:c.398G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001301227.2:c.398G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_003289.4:c.398G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_213674.1:c.398G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000172323	TPM2 homepage - Leiden Muscular Dystrophy pages	no classification provided	not provided	de novo	not provided
SCV003820919	Revvity Omics, Revvity	criteria provided, single submitter (ACMG Guidelines, 2015)	Uncertain significance (Sep 2, 2021)	germline	clinical testing	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000172323

TPM2 homepage - Leiden Muscular Dystrophy pages

no classification provided

not provided

de novo

not provided

SCV003820919

Revvity Omics, Revvity

criteria provided, single submitter

(ACMG Guidelines, 2015)

Uncertain significance
(Sep 2, 2021)

germline

clinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	de novo	not provided	not provided	not provided	not provided	1	not provided	literature only
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Citations

PubMed

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E, Voelkerding K, Rehm HL; ACMG Laboratory Quality Assurance Committee..

Genet Med. 2015 May;17(5):405-24. doi: 10.1038/gim.2015.30. Epub 2015 Mar 5.

PubMed [citation]

PMID:: 25741868
PMCID:: PMC4544753

Details of each submission

From TPM2 homepage - Leiden Muscular Dystrophy pages, SCV000172323.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	not provided	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	de novo	not provided	1	not provided	not provided		not provided	not provided	not provided	not provided

From Revvity Omics, Revvity, SCV003820919.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	PubMed (1)

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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