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NM_000465.4(BARD1):c.690C>G (p.Asp230Glu) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Feb 27, 2014
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000115640.3

Allele description [Variation Report for NM_000465.4(BARD1):c.690C>G (p.Asp230Glu)]

NM_000465.4(BARD1):c.690C>G (p.Asp230Glu)

Gene:
BARD1:BRCA1 associated RING domain 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2q35
Genomic location:
Preferred name:
NM_000465.4(BARD1):c.690C>G (p.Asp230Glu)
Other names:
p.D230E:GAC>GAG
HGVS:
  • NC_000002.12:g.214781184G>C
  • NG_012047.3:g.33528C>G
  • NM_000465.4:c.690C>GMANE SELECT
  • NM_001282543.2:c.633C>G
  • NM_001282545.2:c.215+15877C>G
  • NM_001282548.2:c.158+28228C>G
  • NM_001282549.2:c.364+11113C>G
  • NP_000456.2:p.Asp230Glu
  • NP_001269472.1:p.Asp211Glu
  • LRG_297t1:c.690C>G
  • LRG_297:g.33528C>G
  • LRG_297p1:p.Asp230Glu
  • NC_000002.11:g.215645908G>C
  • NG_012047.2:g.33521C>G
  • NM_000465.2:c.690C>G
  • NM_000465.3:c.690C>G
  • NR_104212.2:n.655C>G
  • NR_104215.2:n.598C>G
Protein change:
D211E
Links:
dbSNP: rs587780034
NCBI 1000 Genomes Browser:
rs587780034
Molecular consequence:
  • NM_001282545.2:c.215+15877C>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001282548.2:c.158+28228C>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001282549.2:c.364+11113C>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000465.4:c.690C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001282543.2:c.633C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NR_104212.2:n.655C>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_104215.2:n.598C>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000149549GeneDx
criteria provided, single submitter

(GeneDx Variant Classification (06012015))
Uncertain significance
(Feb 27, 2014)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From GeneDx, SCV000149549.12

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

This variant is denoted BARD1 c.690C>G at the cDNA level, p.Asp230Glu (D230E) at the protein level, and results in the change of an Aspartic Acid to a Glutamic Acid (GAC>GAG). This variant has not, to our knowledge, been published in the literature as pathogenic or benign. BARD1 Asp230Glu was not observed in approximately 6,500 individuals of European and African American ancestry in the NHLBI Exome Sequencing Project, indicating it is not a common benign variant in these populations. Since Aspartic Acid and Glutamic Acid share similar properties, this is considered a conservative amino acid substitution and is unlikely to affect protein integrity. BARD1 Asp230Glu occurs at a position that is moderately conserved across species and is not located in a known functional domain. In silico analyses predict that this variant is unlikely to alter protein structure or function. Based on currently available information, it is unclear whether BARD1 Asp230Glu is pathogenic or benign. We consider it to be a variant of uncertain significance. Furthermore, BARD1 has been only recently described in association with cancer predisposition and the risks are not well understood.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024