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NM_001374828.1(ARID1B):c.4864A>T (p.Met1622Leu) AND not specified

Germline classification:
Likely benign (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000114276.14

Allele description [Variation Report for NM_001374828.1(ARID1B):c.4864A>T (p.Met1622Leu)]

NM_001374828.1(ARID1B):c.4864A>T (p.Met1622Leu)

Gene:
ARID1B:AT-rich interaction domain 1B [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q25.3
Genomic location:
Preferred name:
NM_001374828.1(ARID1B):c.4864A>T (p.Met1622Leu)
HGVS:
  • NC_000006.12:g.157201089A>T
  • NG_066624.1:g.430064A>T
  • NM_001363725.2:c.2365A>T
  • NM_001371656.1:c.4744A>T
  • NM_001374820.1:c.4744A>T
  • NM_001374828.1:c.4864A>TMANE SELECT
  • NM_017519.3:c.4705A>T
  • NM_020732.3:c.4495A>T
  • NP_001350654.1:p.Met789Leu
  • NP_001358585.1:p.Met1582Leu
  • NP_001361749.1:p.Met1582Leu
  • NP_001361757.1:p.Met1622Leu
  • NP_059989.3:p.Met1569Leu
  • NP_065783.3:p.Met1499Leu
  • NC_000006.11:g.157522223A>T
  • NM_001374828.1:c.4864A>T
Protein change:
M1499L
Links:
dbSNP: rs34870395
NCBI 1000 Genomes Browser:
rs34870395
Molecular consequence:
  • NM_001363725.2:c.2365A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001371656.1:c.4744A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374820.1:c.4744A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001374828.1:c.4864A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_017519.3:c.4705A>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_020732.3:c.4495A>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
4

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000147835Genetic Services Laboratory, University of Chicago
no assertion criteria provided
Likely benigngermlineclinical testing

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown4not providednot providednot providednot providedclinical testing

Details of each submission

From Genetic Services Laboratory, University of Chicago, SCV000147835.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided4not providednot providedclinical testingnot provided

Description

Likely benign based on allele frequency in 1000 Genomes Project or ESP global frequency and its presence in a patient with a rare or unrelated disease phenotype. NOT Sanger confirmed.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided4not providednot providednot provided

Last Updated: Oct 26, 2024