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NM_201253.3(CRB1):c.2222T>C (p.Met741Thr) AND not provided

Germline classification:
Likely pathogenic (2 submissions)
Last evaluated:
Feb 10, 2016
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000086314.5

Allele description [Variation Report for NM_201253.3(CRB1):c.2222T>C (p.Met741Thr)]

NM_201253.3(CRB1):c.2222T>C (p.Met741Thr)

Gene:
CRB1:crumbs cell polarity complex component 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1q31.3
Genomic location:
Preferred name:
NM_201253.3(CRB1):c.2222T>C (p.Met741Thr)
HGVS:
  • NC_000001.11:g.197427547T>C
  • NG_008483.2:g.231086T>C
  • NM_001193640.2:c.1886T>C
  • NM_001257965.2:c.2015T>C
  • NM_001257966.2:c.2128+5591T>C
  • NM_201253.3:c.2222T>CMANE SELECT
  • NP_001180569.1:p.Met629Thr
  • NP_001244894.1:p.Met672Thr
  • NP_957705.1:p.Met741Thr
  • NC_000001.10:g.197396677T>C
  • NM_201253.2:c.2222T>C
  • NR_047563.2:n.2175T>C
  • NR_047564.2:n.2383T>C
  • P82279:p.Met741Thr
Protein change:
M629T
Links:
UniProtKB: P82279#VAR_022956; dbSNP: rs62636267
NCBI 1000 Genomes Browser:
rs62636267
Molecular consequence:
  • NM_001257966.2:c.2128+5591T>C - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001193640.2:c.1886T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001257965.2:c.2015T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_201253.3:c.2222T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NR_047563.2:n.2175T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]
  • NR_047564.2:n.2383T>C - non-coding transcript variant - [Sequence Ontology: SO:0001619]
Observations:
2

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000118460Retina International
no classification provided
not providednot providednot provided

SCV000339402Eurofins Ntd Llc (ga)
criteria provided, single submitter

(EGL Classification Definitions 2015)
Likely pathogenic
(Feb 10, 2016)
germlineclinical testing

Citation Link

Description

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown2not providednot providednot providednot providedclinical testing
not providednot providednot providednot providednot providednot provided1not providedliterature only

Details of each submission

From Retina International, SCV000118460.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot providednot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1not providednot provided1not providednot providednot providednot providednot providednot provided

From Eurofins Ntd Llc (ga), SCV000339402.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided2not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided2not providednot providednot provided

Last Updated: Sep 29, 2024