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NM_000744.7(CHRNA4):c.1066C>T (p.Leu356Phe) AND Tobacco use disorder

Germline classification:
not provided (1 submission)
Review status:
no classification provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000084593.1

Allele description [Variation Report for NM_000744.7(CHRNA4):c.1066C>T (p.Leu356Phe)]

NM_000744.7(CHRNA4):c.1066C>T (p.Leu356Phe)

Gene:
CHRNA4:cholinergic receptor nicotinic alpha 4 subunit [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
20q13.33
Genomic location:
Preferred name:
NM_000744.7(CHRNA4):c.1066C>T (p.Leu356Phe)
HGVS:
  • NC_000020.11:g.63350345G>A
  • NG_011931.1:g.15999C>T
  • NM_000744.7:c.1066C>TMANE SELECT
  • NM_001256573.2:c.538C>T
  • NP_000735.1:p.Leu356Phe
  • NP_001243502.1:p.Leu180Phe
  • NC_000020.10:g.61981697G>A
  • NM_000744.5:c.1066C>T
  • NR_046317.2:n.1275C>T
Protein change:
L180F
Links:
dbSNP: rs121912265
NCBI 1000 Genomes Browser:
rs121912265
Molecular consequence:
  • NM_000744.7:c.1066C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001256573.2:c.538C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NR_046317.2:n.1275C>T - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:
Tobacco use disorder
Identifiers:
MedGen: C0040336

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000116729Psychiatry Genetics Yale University
no classification provided
not providedsomaticnot provided

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedsomaticnot providednot providednot providednot provided1not providedliterature only

Details of each submission

From Psychiatry Genetics Yale University, SCV000116729.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot providednot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1somaticnot provided1not providednot providednot providednot providednot providednot provided

Last Updated: Sep 29, 2024