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NM_000531.6(OTC):c.663G>A (p.Lys221=) AND not provided

Germline classification:
Pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000083530.1

Allele description [Variation Report for NM_000531.6(OTC):c.663G>A (p.Lys221=)]

NM_000531.6(OTC):c.663G>A (p.Lys221=)

Gene:
OTC:ornithine transcarbamylase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp11.4
Genomic location:
Preferred name:
NM_000531.6(OTC):c.663G>A (p.Lys221=)
HGVS:
  • NC_000023.11:g.38403740G>A
  • NG_008471.1:g.56258G>A
  • NM_000531.6:c.663G>AMANE SELECT
  • NP_000522.3:p.Lys221=
  • LRG_846t1:c.663G>A
  • LRG_846:g.56258G>A
  • LRG_846p1:p.Lys221=
  • NC_000023.10:g.38262993G>A
  • NM_000531.5:c.663G>A
Links:
dbSNP: rs281865552
NCBI 1000 Genomes Browser:
rs281865552
Molecular consequence:
  • NM_000531.6:c.663G>A - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000115616GenMed Metabolism Lab
no assertion criteria provided
pathogenicunknownnot provided

PubMed (1)
[See all records that cite this PMID]

Description

p.Lys221Lys, Late, Donor splice site error

SCV000115616

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownnot providednot providednot providednot provided1not providedliterature only

Citations

PubMed

Ten novel mutations of the ornithine transcarbamylase (OTC) gene in OTC deficiency.

Shimadzu M, Matsumoto H, Matsuura T, Kobayashi K, Komaki S, Kiwaki K, Hoshide R, Endo F, Saheki T, Matsuda I.

Hum Mutat. 1998;Suppl 1:S5-7. No abstract available.

PubMed [citation]
PMID:
9452024

Details of each submission

From GenMed Metabolism Lab, SCV000115616.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot provided PubMed (1)

Description

Converted during submission to Pathogenic.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownnot provided1not providednot providednot providednot providednot providednot provided

Last Updated: Mar 26, 2023