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NM_000531.6(OTC):c.269G>A (p.Ser90Asn) AND not provided

Germline classification:
Pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000083379.1

Allele description [Variation Report for NM_000531.6(OTC):c.269G>A (p.Ser90Asn)]

NM_000531.6(OTC):c.269G>A (p.Ser90Asn)

Gene:
OTC:ornithine transcarbamylase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp11.4
Genomic location:
Preferred name:
NM_000531.6(OTC):c.269G>A (p.Ser90Asn)
HGVS:
  • NC_000023.11:g.38369848G>A
  • NG_008471.1:g.22366G>A
  • NM_000531.6:c.269G>AMANE SELECT
  • NP_000522.3:p.Ser90Asn
  • LRG_846t1:c.269G>A
  • LRG_846:g.22366G>A
  • LRG_846p1:p.Ser90Asn
  • NC_000023.10:g.38229101G>A
  • NM_000531.5:c.269G>A
Protein change:
S90N
Links:
dbSNP: rs72554341
NCBI 1000 Genomes Browser:
rs72554341
Molecular consequence:
  • NM_000531.6:c.269G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000115465GenMed Metabolism Lab
no assertion criteria provided
pathogenicunknownnot provided

PubMed (1)
[See all records that cite this PMID]

Description

p.Ser90Asn, Neonatal

SCV000115465

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownnot providednot providednot providednot provided1not providedliterature only

Citations

PubMed

Genotype spectrum of ornithine transcarbamylase deficiency: correlation with the clinical and biochemical phenotype.

McCullough BA, Yudkoff M, Batshaw ML, Wilson JM, Raper SE, Tuchman M.

Am J Med Genet. 2000 Aug 14;93(4):313-9.

PubMed [citation]
PMID:
10946359

Details of each submission

From GenMed Metabolism Lab, SCV000115465.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot provided PubMed (1)

Description

Converted during submission to Pathogenic.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownnot provided1not providednot providednot providednot providednot providednot provided

Last Updated: Mar 26, 2023