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NM_000531.6(OTC):c.259G>A (p.Glu87Lys) AND not provided

Germline classification:
Pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000083376.1

Allele description [Variation Report for NM_000531.6(OTC):c.259G>A (p.Glu87Lys)]

NM_000531.6(OTC):c.259G>A (p.Glu87Lys)

Gene:
OTC:ornithine transcarbamylase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
Xp11.4
Genomic location:
Preferred name:
NM_000531.6(OTC):c.259G>A (p.Glu87Lys)
HGVS:
  • NC_000023.11:g.38369838G>A
  • NG_008471.1:g.22356G>A
  • NM_000531.6:c.259G>AMANE SELECT
  • NP_000522.3:p.Glu87Lys
  • LRG_846t1:c.259G>A
  • LRG_846:g.22356G>A
  • LRG_846p1:p.Glu87Lys
  • NC_000023.10:g.38229091G>A
  • NM_000531.5:c.259G>A
  • P00480:p.Glu87Lys
Protein change:
E87K; GLU87LYS
Links:
UniProtKB: P00480#VAR_004862; OMIM: 300461.0016; dbSNP: rs72554338
NCBI 1000 Genomes Browser:
rs72554338
Molecular consequence:
  • NM_000531.6:c.259G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: CN517202

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV000115462GenMed Metabolism Lab
no assertion criteria provided
pathogenicunknownnot provided

PubMed (1)
[See all records that cite this PMID]

Description

p.Glu87Lys, Late

SCV000115462

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownnot providednot providednot providednot provided1not providedliterature only

Citations

PubMed

Site specific screening for point mutations in ornithine transcarbamylase deficiency.

Feldmann D, Rozet JM, Pelet A, Hentzen D, Briand P, Hubert P, Largilliere C, Rabier D, Farriaux JP, Munnich A.

J Med Genet. 1992 Jul;29(7):471-5.

PubMed [citation]
PMID:
1353535
PMCID:
PMC1016021

Details of each submission

From GenMed Metabolism Lab, SCV000115462.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot provided PubMed (1)

Description

Converted during submission to Pathogenic.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownnot provided1not providednot providednot providednot providednot providednot provided

Last Updated: Mar 26, 2023