U.S. flag

An official website of the United States government

NM_001966.4(EHHADH):c.7G>A (p.Glu3Lys) AND Fanconi renotubular syndrome 3

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jan 9, 2014
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000082871.5

Allele description [Variation Report for NM_001966.4(EHHADH):c.7G>A (p.Glu3Lys)]

NM_001966.4(EHHADH):c.7G>A (p.Glu3Lys)

Gene:
EHHADH:enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3q27.2
Genomic location:
Preferred name:
NM_001966.4(EHHADH):c.7G>A (p.Glu3Lys)
HGVS:
  • NC_000003.12:g.185254016C>T
  • NG_015999.1:g.5083G>A
  • NM_001166415.2:c.-405G>A
  • NM_001966.4:c.7G>AMANE SELECT
  • NP_001957.2:p.Glu3Lys
  • NC_000003.11:g.184971804C>T
  • NM_001966.3:c.7G>A
  • Q08426:p.Glu3Lys
Protein change:
E3K; GLU3LYS
Links:
UniProtKB: Q08426#VAR_070949; OMIM: 607037.0001; dbSNP: rs398124646
NCBI 1000 Genomes Browser:
rs398124646
Molecular consequence:
  • NM_001166415.2:c.-405G>A - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_001966.4:c.7G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Fanconi renotubular syndrome 3 (FRTS3)
Identifiers:
MONDO: MONDO:0014275; MedGen: C3810100; OMIM: 615605

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000114922OMIM
no assertion criteria provided
Pathogenic
(Jan 9, 2014)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Idiopathic Fanconi syndrome in a family. Part I. Clinical aspects.

Tolaymat A, Sakarcan A, Neiberger R.

J Am Soc Nephrol. 1992 Feb;2(8):1310-7.

PubMed [citation]
PMID:
1627757

Mistargeting of peroxisomal EHHADH and inherited renal Fanconi's syndrome.

Klootwijk ED, Reichold M, Helip-Wooley A, Tolaymat A, Broeker C, Robinette SL, Reinders J, Peindl D, Renner K, Eberhart K, Assmann N, Oefner PJ, Dettmer K, Sterner C, Schroeder J, Zorger N, Witzgall R, Reinhold SW, Stanescu HC, Bockenhauer D, Jaureguiberry G, Courtneidge H, et al.

N Engl J Med. 2014 Jan 9;370(2):129-38. doi: 10.1056/NEJMoa1307581.

PubMed [citation]
PMID:
24401050

Details of each submission

From OMIM, SCV000114922.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

In affected members of a family with autosomal dominant Fanconi renotubular syndrome-3 (FRTS3; 615605) originally reported by Tolaymat et al. (1992), Klootwijk et al. (2014) identified a heterozygous c.7G-A transition in exon 1 of the EHHADH gene, resulting in a glu3-to-lys (E3K) substitution at a highly conserved residue. The substitution predicted the creation of an N-terminal mitochondrial targeting motif. The mutation was found by genomewide linkage analysis followed by Sanger sequencing of candidate genes in the region. The mutation segregated with the disorder in the family, and was not present in the dbSNP (build 137) or 1000 Genomes Project databases, or in 200 control alleles. Transfection of the mutation into several cell lines, including a renal proximal tubular cell line, showed that the mutant protein localized to mitochondria as well as to peroxisomes, whereas wildtype EHHADH localized only to peroxisomes. Electron microscopy of cells with the mutation showed no mitochondrial morphologic abnormalities. However, transfected renal tubular cells showed a defect in the transepithelial transport of fluids, with an inability to maintain fluid-filled domes in confluent monolayers. Transfected cells also showed a defect in luminal to basolateral transport of a glucose surrogate. These changes were associated with a defect in mitochondrial respiration and impaired ATP production. Mutant EHHADH coimmunoprecipitated with mitochondrial HADHA (600890) and HADHB (143450), which likely impaired mitochondrial function. These findings, combined with the lack of renal or mitochondrial dysfunction in Ehhadh-null mice, were consistent with a dominant-negative toxic effect of the mutant EHHADH protein rather than haploinsufficiency.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 10, 2024