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NM_000016.6(ACADM):c.583G>A (p.Gly195Arg) AND not provided

Germline classification:
Pathogenic (2 submissions)
Last evaluated:
Jun 14, 2022
Review status:
2 stars out of maximum of 4 stars
criteria provided, multiple submitters, no conflicts
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000077891.19

Allele description [Variation Report for NM_000016.6(ACADM):c.583G>A (p.Gly195Arg)]

NM_000016.6(ACADM):c.583G>A (p.Gly195Arg)

Gene:
ACADM:acyl-CoA dehydrogenase medium chain [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
1p31.1
Genomic location:
Preferred name:
NM_000016.6(ACADM):c.583G>A (p.Gly195Arg)
Other names:
G170R
HGVS:
  • NC_000001.11:g.75740094G>A
  • NG_007045.2:g.20737G>A
  • NM_000016.6:c.583G>AMANE SELECT
  • NM_001127328.3:c.595G>A
  • NM_001286042.2:c.475G>A
  • NM_001286043.2:c.682G>A
  • NM_001286044.2:c.16G>A
  • NP_000007.1:p.Gly195Arg
  • NP_000007.1:p.Gly195Arg
  • NP_000007.1:p.Gly195Arg
  • NP_001120800.1:p.Gly199Arg
  • NP_001272971.1:p.Gly159Arg
  • NP_001272972.1:p.Gly228Arg
  • NP_001272973.1:p.Gly6Arg
  • LRG_838t1:c.583G>A
  • LRG_838:g.20737G>A
  • LRG_838p1:p.Gly195Arg
  • NC_000001.10:g.76205779G>A
  • NM_000016.4:c.583G>A
  • NM_000016.5:c.583G>A
  • P11310:p.Gly195Arg
Nucleotide change:
583G>A
Protein change:
G159R; GLY170ARG
Links:
UniProtKB: P11310#VAR_000321; OMIM: 607008.0009; dbSNP: rs121434278
NCBI 1000 Genomes Browser:
rs121434278
Molecular consequence:
  • NM_000016.6:c.583G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001127328.3:c.595G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001286042.2:c.475G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001286043.2:c.682G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001286044.2:c.16G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
4

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000231983Eurofins Ntd Llc (ga)
criteria provided, single submitter

(EGL Classification Definitions)
Pathogenic
(Nov 13, 2013)
germlineclinical testing

Citation Link,

SCV000511932GeneDx
criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)
Pathogenic
(Jun 14, 2022)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknown4not providednot providednot providednot providedclinical testing
not providedgermlineyesnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Eurofins Ntd Llc (ga), SCV000231983.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided4not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot provided4not providednot providednot provided

From GeneDx, SCV000511932.6

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Functional studies found that this variant is associated with no residual medium chain acyl-CoA dehydrogenase activity (Brackett et al., 1994.; Not observed at a significant frequency in large population cohorts (gnomAD); In silico analysis, which includes protein predictors and evolutionary conservation, supports a deleterious effect; This variant is associated with the following publications: (PMID: 25087612, 11524729, 18241067, 19224950, 7929823, 31012112, 32556492, 9158144, 33580884)

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 3, 2024