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NM_001164277.2(SLC37A4):c.898C>T (p.Arg300Cys) AND not provided

Germline classification:
Pathogenic (2 submissions)
Last evaluated:
Jan 1, 2020
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000059145.23

Allele description [Variation Report for NM_001164277.2(SLC37A4):c.898C>T (p.Arg300Cys)]

NM_001164277.2(SLC37A4):c.898C>T (p.Arg300Cys)

Gene:
SLC37A4:solute carrier family 37 member 4 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11q23.3
Genomic location:
Preferred name:
NM_001164277.2(SLC37A4):c.898C>T (p.Arg300Cys)
HGVS:
  • NC_000011.10:g.119026053G>A
  • NG_013331.1:g.9853C>T
  • NM_001164277.2:c.898C>TMANE SELECT
  • NM_001164278.2:c.898C>T
  • NM_001164279.2:c.679C>T
  • NM_001164280.2:c.898C>T
  • NM_001467.6:c.898C>T
  • NP_001157749.1:p.Arg300Cys
  • NP_001157749.1:p.Arg300Cys
  • NP_001157750.1:p.Arg300Cys
  • NP_001157751.1:p.Arg227Cys
  • NP_001157752.1:p.Arg300Cys
  • NP_001458.1:p.Arg300Cys
  • LRG_187t1:c.898C>T
  • LRG_187:g.9853C>T
  • LRG_187p1:p.Arg300Cys
  • NC_000011.9:g.118896763G>A
  • NM_001164277.1:c.898C>T
Protein change:
R227C
Links:
UniProtKB/Swiss-Prot: VAR_066397; dbSNP: rs193302880
NCBI 1000 Genomes Browser:
rs193302880
Molecular consequence:
  • NM_001164277.2:c.898C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001164278.2:c.898C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001164279.2:c.679C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001164280.2:c.898C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001467.6:c.898C>T - missense variant - [Sequence Ontology: SO:0001583]
Observations:
3

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000090674UniProtKB/Swiss-Prot
no classification provided
not providedgermlinenot provided

PubMed (1)
[See all records that cite this PMID]

SCV001248725CeGaT Center for Human Genetics Tuebingen
criteria provided, single submitter

(CeGaT Center For Human Genetics Tuebingen Variant Classification Criteria Version 2)
Pathogenic
(Jan 1, 2020)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes3not providednot providednot providednot providedclinical testing
not providedgermlinenot providednot providednot providednot provided1not providedliterature only

Citations

PubMed

The putative glucose 6-phosphate translocase gene is mutated in essentially all cases of glycogen storage disease type I non-a.

Veiga-da-Cunha M, Gerin I, Chen YT, Lee PJ, Leonard JV, Maire I, Wendel U, Vikkula M, Van Schaftingen E.

Eur J Hum Genet. 1999 Sep;7(6):717-23.

PubMed [citation]
PMID:
10482962

Details of each submission

From UniProtKB/Swiss-Prot, SCV000090674.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot provided PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot provided1not providednot providednot providednot providednot providednot provided

From CeGaT Center for Human Genetics Tuebingen, SCV001248725.25

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided3not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot provided3not providednot providednot provided

Last Updated: Oct 8, 2024