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NM_000335.5(SCN5A):c.4892G>A (p.Arg1631His) AND Conduction system disorder

Germline classification:
not provided (1 submission)
Review status:
no classification provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000058723.3

Allele description [Variation Report for NM_000335.5(SCN5A):c.4892G>A (p.Arg1631His)]

NM_000335.5(SCN5A):c.4892G>A (p.Arg1631His)

Gene:
SCN5A:sodium voltage-gated channel alpha subunit 5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p22.2
Genomic location:
Preferred name:
NM_000335.5(SCN5A):c.4892G>A (p.Arg1631His)
HGVS:
  • NC_000003.12:g.38551477C>T
  • NG_008934.1:g.103196G>A
  • NM_000335.5:c.4892G>AMANE SELECT
  • NM_001099404.2:c.4895G>A
  • NM_001099405.2:c.4841G>A
  • NM_001160160.2:c.4796G>A
  • NM_001160161.2:c.4733G>A
  • NM_001354701.2:c.4838G>A
  • NM_198056.3:c.4895G>A
  • NP_000326.2:p.Arg1631His
  • NP_001092874.1:p.Arg1632His
  • NP_001092875.1:p.Arg1614His
  • NP_001153632.1:p.Arg1599His
  • NP_001153633.1:p.Arg1578His
  • NP_001341630.1:p.Arg1613His
  • NP_932173.1:p.Arg1632His
  • NP_932173.1:p.Arg1632His
  • LRG_289t1:c.4895G>A
  • LRG_289t3:c.4895G>A
  • LRG_289:g.103196G>A
  • LRG_289p1:p.Arg1632His
  • NC_000003.11:g.38592968C>T
  • NM_001099404.1:c.4895G>A
  • NM_198056.2:c.4895G>A
  • NM_198056.3:c.4895G>A
Protein change:
R1578H
Links:
dbSNP: rs199473286
NCBI 1000 Genomes Browser:
rs199473286
Molecular consequence:
  • NM_000335.5:c.4892G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001099404.2:c.4895G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001099405.2:c.4841G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001160160.2:c.4796G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001160161.2:c.4733G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354701.2:c.4838G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198056.3:c.4895G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Conduction system disorder
Synonyms:
Cardiac conduction disease; Cardiac conduction defect, nonspecific
Identifiers:
EFO: EFO_0005137; MONDO: MONDO:0005449; MedGen: C2748542

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000090243Cardiovascular Biomedical Research Unit, Royal Brompton & Harefield NHS Foundation Trust
no classification provided
not providedgermlineliterature only

PubMed (4)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Congenital sick sinus syndrome caused by recessive mutations in the cardiac sodium channel gene (SCN5A).

Benson DW, Wang DW, Dyment M, Knilans TK, Fish FA, Strieper MJ, Rhodes TH, George AL Jr.

J Clin Invest. 2003 Oct;112(7):1019-28.

PubMed [citation]
PMID:
14523039
PMCID:
PMC198523

Mutation-specific effects of polymorphism H558R in SCN5A-related sick sinus syndrome.

Gui J, Wang T, Trump D, Zimmer T, Lei M.

J Cardiovasc Electrophysiol. 2010 May;21(5):564-73. doi: 10.1111/j.1540-8167.2010.01762.x. Epub 2010 Apr 6.

PubMed [citation]
PMID:
20384651
See all PubMed Citations (4)

Details of each submission

From Cardiovascular Biomedical Research Unit, Royal Brompton & Harefield NHS Foundation Trust, SCV000090243.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (4)

Description

This variant has been reported in the following publications (PMID:14523039;PMID:20384651;PMID:20539757).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 8, 2024