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NM_000335.5(SCN5A):c.4032G>T (p.Trp1344Cys) AND Brugada syndrome

Germline classification:
not provided (1 submission)
Review status:
no classification provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000058631.2

Allele description [Variation Report for NM_000335.5(SCN5A):c.4032G>T (p.Trp1344Cys)]

NM_000335.5(SCN5A):c.4032G>T (p.Trp1344Cys)

Gene:
SCN5A:sodium voltage-gated channel alpha subunit 5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p22.2
Genomic location:
Preferred name:
NM_000335.5(SCN5A):c.4032G>T (p.Trp1344Cys)
HGVS:
  • NC_000003.12:g.38560357C>A
  • NG_008934.1:g.94316G>T
  • NM_000335.5:c.4032G>TMANE SELECT
  • NM_001099404.2:c.4035G>T
  • NM_001099405.2:c.4035G>T
  • NM_001160160.2:c.4032G>T
  • NM_001160161.2:c.3873G>T
  • NM_001354701.2:c.4032G>T
  • NM_198056.3:c.4035G>T
  • NP_000326.2:p.Trp1344Cys
  • NP_001092874.1:p.Trp1345Cys
  • NP_001092875.1:p.Trp1345Cys
  • NP_001153632.1:p.Trp1344Cys
  • NP_001153633.1:p.Trp1291Cys
  • NP_001341630.1:p.Trp1344Cys
  • NP_932173.1:p.Trp1345Cys
  • NP_932173.1:p.Trp1345Cys
  • LRG_289t1:c.4035G>T
  • LRG_289:g.94316G>T
  • LRG_289p1:p.Trp1345Cys
  • NC_000003.11:g.38601848C>A
  • NM_198056.2:c.4035G>T
Protein change:
W1291C
Links:
dbSNP: rs199473606
NCBI 1000 Genomes Browser:
rs199473606
Molecular consequence:
  • NM_000335.5:c.4032G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001099404.2:c.4035G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001099405.2:c.4035G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001160160.2:c.4032G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001160161.2:c.3873G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001354701.2:c.4032G>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_198056.3:c.4035G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Brugada syndrome
Synonyms:
Sudden unexpected nocturnal death syndrome; Sudden unexplained nocturnal death syndrome; Sudden Unexplained Death Syndrome; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0015263; MedGen: C1142166; OMIM: PS601144

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000090151Cardiovascular Biomedical Research Unit, Royal Brompton & Harefield NHS Foundation Trust
no classification provided
not providedgermlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Childhood brugada syndrome in two korean families.

Lee YS, Baek JS, Kim SY, Seo SW, Kwon BS, Kim GB, Bae EJ, Park SS, Noh CI.

Korean Circ J. 2010 Mar;40(3):143-7. doi: 10.4070/kcj.2010.40.3.143. Epub 2010 Mar 24.

PubMed [citation]
PMID:
20339501
PMCID:
PMC2844982

Paralogous annotation of disease-causing variants in long QT syndrome genes.

Ware JS, Walsh R, Cunningham F, Birney E, Cook SA.

Hum Mutat. 2012 Aug;33(8):1188-1191. doi: 10.1002/humu.22114. Epub 2012 Jun 7.

PubMed [citation]
PMID:
22581653
PMCID:
PMC4640174

Details of each submission

From Cardiovascular Biomedical Research Unit, Royal Brompton & Harefield NHS Foundation Trust, SCV000090151.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

This variant has been reported as associated with Brugada syndrome in the following publications (PMID:20339501). This is a literature report, and does not necessarily reflect the clinical interpretation of the Imperial College / Royal Brompton Cardiovascular Genetics laboratory.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 5, 2022