U.S. flag

An official website of the United States government

NM_001042432.2(CLN3):c.1056G>C (p.Gln352His) AND Neuronal ceroid lipofuscinosis 3

Germline classification:
Likely pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000049660.1

Allele description [Variation Report for NM_001042432.2(CLN3):c.1056G>C (p.Gln352His)]

NM_001042432.2(CLN3):c.1056G>C (p.Gln352His)

Gene:
CLN3:CLN3 lysosomal/endosomal transmembrane protein, battenin [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
16p12.1
Genomic location:
Preferred name:
NM_001042432.2(CLN3):c.1056G>C (p.Gln352His)
HGVS:
  • NC_000016.10:g.28482105C>G
  • NG_008654.2:g.15198G>C
  • NM_000086.2:c.1056G>C
  • NM_001042432.2:c.1056G>CMANE SELECT
  • NM_001286104.2:c.984G>C
  • NM_001286105.2:c.756G>C
  • NM_001286109.2:c.822G>C
  • NM_001286110.2:c.894G>C
  • NP_000077.1:p.Gln352His
  • NP_001035897.1:p.Gln352His
  • NP_001035897.1:p.Gln352His
  • NP_001273033.1:p.Gln328His
  • NP_001273034.1:p.Gln252His
  • NP_001273038.1:p.Gln274His
  • NP_001273039.1:p.Gln298His
  • LRG_689t1:c.1056G>C
  • LRG_689t2:c.1056G>C
  • LRG_689:g.15198G>C
  • LRG_689p1:p.Gln352His
  • LRG_689p2:p.Gln352His
  • NC_000016.9:g.28493426C>G
  • NM_001042432.1:c.1056G>C
Protein change:
Q252H
Links:
dbSNP: rs386833699
NCBI 1000 Genomes Browser:
rs386833699
Molecular consequence:
  • NM_000086.2:c.1056G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001042432.2:c.1056G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001286104.2:c.984G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001286105.2:c.756G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001286109.2:c.822G>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001286110.2:c.894G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Neuronal ceroid lipofuscinosis 3 (CLN3)
Synonyms:
Spielmeyer Sjogren disease; CLN3 Disease; CLN3-Related Neuronal Ceroid-Lipofuscinosis
Identifiers:
MONDO: MONDO:0008767; MedGen: C0751383; Orphanet: 228346; OMIM: 204200

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000082067Juha Muilu Group; Institute for Molecular Medicine Finland (FIMM)
no assertion criteria provided
probable-pathogenicnot providednot provided

PubMed (1)
[See all records that cite this PMID]

Description

FinDis database variant: This variant was not found or characterized by our laboratory, data were collected from public sources: see reference

SCV000082067

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providednot providednot providednot providednot providednot provided1not providedliterature only

Citations

PubMed

Update of the mutation spectrum and clinical correlations of over 360 mutations in eight genes that underlie the neuronal ceroid lipofuscinoses.

Kousi M, Lehesjoki AE, Mole SE.

Hum Mutat. 2012 Jan;33(1):42-63. doi: 10.1002/humu.21624. Epub 2011 Nov 16. Review.

PubMed [citation]
PMID:
21990111

Details of each submission

From Juha Muilu Group; Institute for Molecular Medicine Finland (FIMM), SCV000082067.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providednot provided PubMed (1)

Description

Converted during submission to Likely pathogenic.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1not providednot provided1not providednot providednot providednot providednot providednot provided

Last Updated: Feb 18, 2023