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NM_000368.5(TSC1):c.647T>C (p.Phe216Ser) AND Tuberous sclerosis syndrome

Germline classification:
not provided (1 submission)
Review status:
no classification provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000042326.3

Allele description [Variation Report for NM_000368.5(TSC1):c.647T>C (p.Phe216Ser)]

NM_000368.5(TSC1):c.647T>C (p.Phe216Ser)

Gene:
TSC1:TSC complex subunit 1 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q34.13
Genomic location:
Preferred name:
NM_000368.5(TSC1):c.647T>C (p.Phe216Ser)
HGVS:
  • NC_000009.12:g.132921835A>G
  • NG_012386.1:g.27799T>C
  • NM_000368.5:c.647T>CMANE SELECT
  • NM_001162426.2:c.647T>C
  • NM_001162427.2:c.494T>C
  • NM_001362177.2:c.284T>C
  • NP_000359.1:p.Phe216Ser
  • NP_000359.1:p.Phe216Ser
  • NP_001155898.1:p.Phe216Ser
  • NP_001155899.1:p.Phe165Ser
  • NP_001349106.1:p.Phe95Ser
  • LRG_486t1:c.647T>C
  • LRG_486:g.27799T>C
  • LRG_486p1:p.Phe216Ser
  • NC_000009.11:g.135797222A>G
  • NM_000368.3:c.647T>C
  • NM_000368.4:c.647T>C
  • p.(Phe216Ser)
Protein change:
F165S
Links:
Tuberous sclerosis database (TSC1): TSC1_00426; dbSNP: rs118203416
NCBI 1000 Genomes Browser:
rs118203416
Molecular consequence:
  • NM_000368.5:c.647T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001162426.2:c.647T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001162427.2:c.494T>C - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001362177.2:c.284T>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Tuberous sclerosis syndrome (TSC)
Synonyms:
Tuberous sclerosis
Identifiers:
MONDO: MONDO:0001734; MedGen: C0041341; OMIM: PS191100

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000066115Tuberous sclerosis database (TSC1)
no classification provided

(Tuberous Sclerosis Database Assertion Criteria 2015)
not providedgermlinecuration

PubMed (1)
[See all records that cite this PMID]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes3not providednot providednot providednot providedcuration

Citations

PubMed

Functional assessment of variants in the TSC1 and TSC2 genes identified in individuals with Tuberous Sclerosis Complex.

Hoogeveen-Westerveld M, Wentink M, van den Heuvel D, Mozaffari M, Ekong R, Povey S, den Dunnen JT, Metcalfe K, Vallee S, Krueger S, Bergoffen J, Shashi V, Elmslie F, Kwiatkowski D, Sampson J, Vidales C, Dzarir J, Garcia-Planells J, Dies K, Maat-Kievit A, van den Ouweland A, Halley D, et al.

Hum Mutat. 2011 Apr;32(4):424-35. doi: 10.1002/humu.21451. Epub 2011 Mar 8.

PubMed [citation]
PMID:
21309039

Details of each submission

From Tuberous sclerosis database (TSC1), SCV000066115.3

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedcuration PubMed (1)
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jun 2, 2024