ClinVar

NM_000335.5(SCN5A):c.5882C>T (p.Pro1961Leu)

Gene:

SCN5A:sodium voltage-gated channel alpha subunit 5 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

3p22.2

Genomic location:

• Chr3: 38550487 (on Assembly GRCh38)
• Chr3: 38591978 (on Assembly GRCh37)

Preferred name:

NM_000335.5(SCN5A):c.5882C>T (p.Pro1961Leu)

Other names:

p.P1962L:CCA>CTA

HGVS:

• NC_000003.12:g.38550487G>A
• NG_008934.1:g.104186C>T
• NM_000335.5:c.5882C>TMANE SELECT
• NM_001099404.2:c.5885C>T
• NM_001099405.2:c.5831C>T
• NM_001160160.2:c.5786C>T
• NM_001160161.2:c.5723C>T
• NM_001354701.2:c.5828C>T
• NM_198056.3:c.5885C>T
• NP_000326.2:p.Pro1961Leu
• NP_001092874.1:p.Pro1962Leu
• NP_001092875.1:p.Pro1944Leu
• NP_001153632.1:p.Pro1929Leu
• NP_001153633.1:p.Pro1908Leu
• NP_001341630.1:p.Pro1943Leu
• NP_932173.1:p.Pro1962Leu
• NP_932173.1:p.Pro1962Leu
• LRG_289t1:c.5885C>T
• LRG_289:g.104186C>T
• LRG_289p1:p.Pro1962Leu
• NC_000003.11:g.38591978G>A
• NM_198056.2:c.5885C>T
• Q14524:p.Pro1962Leu
• c.5885C>T

This HGVS expression did not pass validation

Protein change:

P1908L

Links:

UniProtKB: Q14524#VAR_074481; dbSNP: rs199473638

NCBI 1000 Genomes Browser:

rs199473638

Molecular consequence:

• NM_000335.5:c.5882C>T - missense variant - [Sequence Ontology: SO:0001583]
• NM_001099404.2:c.5885C>T - missense variant - [Sequence Ontology: SO:0001583]
• NM_001099405.2:c.5831C>T - missense variant - [Sequence Ontology: SO:0001583]
• NM_001160160.2:c.5786C>T - missense variant - [Sequence Ontology: SO:0001583]
• NM_001160161.2:c.5723C>T - missense variant - [Sequence Ontology: SO:0001583]
• NM_001354701.2:c.5828C>T - missense variant - [Sequence Ontology: SO:0001583]
• NM_198056.3:c.5885C>T - missense variant - [Sequence Ontology: SO:0001583]

Observations:

1