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NM_000518.5(HBB):c.262A>C (p.Thr88Pro) AND beta Thalassemia

Germline classification:
Benign (1 submission)
Last evaluated:
May 28, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000029973.3

Allele description [Variation Report for NM_000518.5(HBB):c.262A>C (p.Thr88Pro)]

NM_000518.5(HBB):c.262A>C (p.Thr88Pro)

Genes:
LOC106099062:HBB recombination region [Gene]
HBB:hemoglobin subunit beta [Gene - OMIM - HGNC]
LOC107133510:origin of replication at HBB [Gene]
Variant type:
single nucleotide variant
Cytogenetic location:
11p15.4
Genomic location:
Preferred name:
NM_000518.5(HBB):c.262A>C (p.Thr88Pro)
Other names:
T87P
HGVS:
  • NC_000011.10:g.5226630T>G
  • NG_000007.3:g.70986A>C
  • NG_042296.1:g.161T>G
  • NG_046672.1:g.4565T>G
  • NG_053049.1:g.2951T>G
  • NG_059281.1:g.5442A>C
  • NM_000518.5:c.262A>CMANE SELECT
  • NP_000509.1:p.Thr88Pro
  • LRG_1232t1:c.262A>C
  • LRG_1232:g.5442A>C
  • LRG_1232p1:p.Thr88Pro
  • NC_000011.9:g.5247860T>G
  • NM_000518.4:c.262A>C
  • P68871:p.Thr88Pro
Protein change:
T88P; THR87PRO
Links:
UniProtKB: P68871#VAR_002992; OMIM: 141900.0400; dbSNP: rs35553496
NCBI 1000 Genomes Browser:
rs35553496
Molecular consequence:
  • NM_000518.5:c.262A>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
beta Thalassemia (BTHAL)
Synonyms:
Cooley's anemia; Erythroblastic anemia; Mediterranean anemia
Identifiers:
MONDO: MONDO:0019402; MedGen: C0005283; Orphanet: 848

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001138216Mendelics
criteria provided, single submitter

(Mendelics Assertion Criteria 2017)
Benign
(May 28, 2019)
unknownclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Mendelics, SCV001138216.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jul 15, 2024