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NM_014908.4(DOLK):c.1222C>G (p.His408Asp) AND DK1-congenital disorder of glycosylation

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Dec 1, 2011
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000023835.3

Allele description [Variation Report for NM_014908.4(DOLK):c.1222C>G (p.His408Asp)]

NM_014908.4(DOLK):c.1222C>G (p.His408Asp)

Gene:
DOLK:dolichol kinase [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
9q34.11
Genomic location:
Preferred name:
NM_014908.4(DOLK):c.1222C>G (p.His408Asp)
HGVS:
  • NC_000009.12:g.128946082G>C
  • NG_017009.1:g.6652C>G
  • NG_033111.1:g.3390G>C
  • NM_014908.4:c.1222C>GMANE SELECT
  • NP_055723.1:p.His408Asp
  • LRG_744:g.6652C>G
  • NC_000009.11:g.131708361G>C
Protein change:
H408D; HIS408ASP
Links:
OMIM: 610746.0003; dbSNP: rs387907030
NCBI 1000 Genomes Browser:
rs387907030
Molecular consequence:
  • NM_014908.4:c.1222C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
DK1-congenital disorder of glycosylation
Synonyms:
CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Im; CDG Im; DK1 DEFICIENCY; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0012556; MedGen: C1835849; Orphanet: 91131; OMIM: 610768

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000045126OMIM
no assertion criteria provided
Pathogenic
(Dec 1, 2011)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Autosomal recessive dilated cardiomyopathy due to DOLK mutations results from abnormal dystroglycan O-mannosylation.

Lefeber DJ, de Brouwer AP, Morava E, Riemersma M, Schuurs-Hoeijmakers JH, Absmanner B, Verrijp K, van den Akker WM, Huijben K, Steenbergen G, van Reeuwijk J, Jozwiak A, Zucker N, Lorber A, Lammens M, Knopf C, van Bokhoven H, Grünewald S, Lehle L, Kapusta L, Mandel H, Wevers RA.

PLoS Genet. 2011 Dec;7(12):e1002427. doi: 10.1371/journal.pgen.1002427. Epub 2011 Dec 29.

PubMed [citation]
PMID:
22242004
PMCID:
PMC3248466

Details of each submission

From OMIM, SCV000045126.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

In affected children from 2 consanguineous Israeli Druze families with congenital disorder of glycosylation type Im (CDG1M; 610768), Lefeber et al. (2011) identified homozygosity for a 1222C-G transversion in the DOLK gene, resulting in a his408-to-asp (H408D) substitution at a highly conserved residue. The mutation was not found in more than 1,000 Caucasian controls or in the 1000 Genomes Project. Although the families resided in 2 different villages in northern Israel and were believed to be unrelated, the presence of an identical 5-Mb haplotype and mutation suggested a founder event among these Druze kindreds. Functional analysis in temperature-sensitive underglycosylated sec59 yeast cells demonstrated that the mutant protein failed to restore glycosylation to the same extent as wildtype. Cardiac tissue from a patient's explanted heart showed reduced O-mannosylation of alpha dystroglycan (128239) with concomitant functional loss of its laminin (see 150320)-binding capacity.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Mar 18, 2023