NM_000518.4(HBB):c.338G>T (p.Cys113Phe) AND HEMOGLOBIN CANTERBURY

Germline classification:: other (1 submission)
Last evaluated:: Dec 12, 2017
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000016862.3

Allele description [Variation Report for NM_000518.4(HBB):c.338G>T (p.Cys113Phe)]

NM_000518.4(HBB):c.338G>T (p.Cys113Phe)

Genes:

LOC110006319:beta-globin gene 3' regulatory region [Gene]
HBB:hemoglobin subunit beta [Gene - OMIM - HGNC]
LOC107133510:origin of replication at HBB [Gene]

Variant type:

single nucleotide variant

Cytogenetic location:

11p15.4

Genomic location:

Preferred name:

NM_000518.4(HBB):c.338G>T (p.Cys113Phe)

Other names:

C112F

HGVS:

NC_000011.10:g.5225704C>A
NG_000007.3:g.71912G>T
NG_046672.1:g.3639C>A
NG_053049.1:g.2025C>A
NG_059281.1:g.6368G>T
NM_000518.5:c.338G>TMANE SELECT
NP_000509.1:p.Cys113Phe
LRG_1232t1:c.338G>T
LRG_1232:g.6368G>T
LRG_1232p1:p.Cys113Phe
NC_000011.9:g.5246934C>A
P68871:p.Cys113Phe

Protein change:

C113F; CYS112PHE

Links:

HBVAR: 1136; UniProtKB: P68871#VAR_025397; OMIM: 141900.0506; dbSNP: rs33932908

NCBI 1000 Genomes Browser:

rs33932908

Molecular consequence:

NM_000518.5:c.338G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: HEMOGLOBIN CANTERBURY
Identifiers:

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000037132	OMIM	no assertion criteria provided	other (Dec 12, 2017)	germline	literature only	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000037132

OMIM

no assertion criteria provided

other
(Dec 12, 2017)

germline

literature only

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	not provided	not provided	not provided	not provided	not provided	not provided	literature only

Citations

PubMed

Hb Canterbury [beta112(G14)Cys-->Phe]: a new, mildly unstable variant.

Brennan SO, Potter HC, Kubala LM, Carnoutsos SA, Ferguson MM.

Hemoglobin. 2002 Feb;26(1):67-9. No abstract available.

PubMed [citation]

PMID:: 11939514

Details of each submission

From OMIM, SCV000037132.4

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	literature only	PubMed (1)

Description

Brennan et al. (2002) found hemoglobin Canterbury by chance when a supposedly normal lysate was used as a control for an isopropanol stability test. The sample came from a 55-year-old man with Cowden disease (601728). The isopropanol stability test showed a precipitate, suggesting a slightly unstable hemoglobin.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	not provided	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 23, 2022

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