NM_000518.4(HBB):c.26A>G (p.Lys9Arg) AND HEMOGLOBIN LUCKNOW

Germline classification:: other (1 submission)
Last evaluated:: Dec 12, 2017
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV000016839.3

Allele description [Variation Report for NM_000518.4(HBB):c.26A>G (p.Lys9Arg)]

NM_000518.4(HBB):c.26A>G (p.Lys9Arg)

Genes:

LOC106099062:HBB recombination region [Gene]
HBB:hemoglobin subunit beta [Gene - OMIM - HGNC]
LOC107133510:origin of replication at HBB [Gene]

Variant type:

single nucleotide variant

Cytogenetic location:

11p15.4

Genomic location:

Preferred name:

NM_000518.4(HBB):c.26A>G (p.Lys9Arg)

Other names:

K8R

HGVS:

NC_000011.10:g.5226996T>C
NG_000007.3:g.70620A>G
NG_042296.1:g.527T>C
NG_046672.1:g.4931T>C
NG_059281.1:g.5076A>G
NM_000518.5:c.26A>GMANE SELECT
NP_000509.1:p.Lys9Arg
LRG_1232t1:c.26A>G
LRG_1232:g.5076A>G
LRG_1232p1:p.Lys9Arg
NC_000011.9:g.5248226T>C

Protein change:

K9R; LYS8ARG

Links:

HBVAR: 1257; OMIM: 141900.0484; dbSNP: rs33932981

NCBI 1000 Genomes Browser:

rs33932981

Molecular consequence:

NM_000518.5:c.26A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: HEMOGLOBIN LUCKNOW
Identifiers:

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV000037109	OMIM	no assertion criteria provided	other (Dec 12, 2017)	germline	literature only	PubMed (1) [See all records that cite this PMID]

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV000037109

OMIM

no assertion criteria provided

other
(Dec 12, 2017)

germline

literature only

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	not provided	not provided	not provided	not provided	not provided	not provided	literature only

Citations

PubMed

A novel Indian beta-thalassemia mutation: Hb Lucknow [beta8(A5)Lys-->Arg]].

Agarwal S, Hattori Y, Gupta UR, Agarwal SS.

Hemoglobin. 1999 Aug;23(3):263-5. No abstract available.

PubMed [citation]

PMID:: 10490139

Details of each submission

From OMIM, SCV000037109.4

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	literature only	PubMed (1)

Description

Agarwal et al. (1999) found an A-to-G transition in exon 1 of the HBB gene at codon 8 which resulted in a lys8-to-arg amino acid substitution. This change was associated with a splice mutation and was speculated to produce a thalassemia intermedia phenotype in the subject.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	not provided	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Apr 23, 2022

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