U.S. flag

An official website of the United States government

NM_000518.4(HBB):c.238G>T (p.Asp80Tyr) AND HEMOGLOBIN TAMPA

Germline classification:
other (1 submission)
Last evaluated:
Dec 12, 2017
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000016623.12

Allele description [Variation Report for NM_000518.4(HBB):c.238G>T (p.Asp80Tyr)]

NM_000518.4(HBB):c.238G>T (p.Asp80Tyr)

Genes:
LOC106099062:HBB recombination region [Gene]
HBB:hemoglobin subunit beta [Gene - OMIM - HGNC]
LOC107133510:origin of replication at HBB [Gene]
Variant type:
single nucleotide variant
Cytogenetic location:
11p15.4
Genomic location:
Preferred name:
NM_000518.4(HBB):c.238G>T (p.Asp80Tyr)
Other names:
D79Y
HGVS:
  • NC_000011.10:g.5226654C>A
  • NG_000007.3:g.70962G>T
  • NG_042296.1:g.185C>A
  • NG_046672.1:g.4589C>A
  • NG_053049.1:g.2975C>A
  • NG_059281.1:g.5418G>T
  • NM_000518.5:c.238G>TMANE SELECT
  • NP_000509.1:p.Asp80Tyr
  • LRG_1232t1:c.238G>T
  • LRG_1232:g.5418G>T
  • LRG_1232p1:p.Asp80Tyr
  • NC_000011.9:g.5247884C>A
  • P68871:p.Asp80Tyr
Protein change:
D80Y; ASP79TYR
Links:
HBVAR: 399; UniProtKB: P68871#VAR_002983; OMIM: 141900.0281; dbSNP: rs33990858
NCBI 1000 Genomes Browser:
rs33990858
Molecular consequence:
  • NM_000518.5:c.238G>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
HEMOGLOBIN TAMPA
Identifiers:

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000036892OMIM
no assertion criteria provided
other
(Dec 12, 2017)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Hemoglobin Pasadena,alpha 2 beta 275(E19)Leu leads to Arg. Identification by high performance liquid chromatography of a new unstable variant with increased oxygen affinity.

Johnson CS, Moyes D, Schroeder WA, Shelton JB, Shelton JR, Beutler E.

Biochim Biophys Acta. 1980 Jun 26;623(2):360-7.

PubMed [citation]
PMID:
7397219

Details of each submission

From OMIM, SCV000036892.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

See Johnson et al. (1980).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 13, 2024