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NM_000233.4(LHCGR):c.1777G>C (p.Ala593Pro) AND Leydig cell agenesis

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Nov 1, 1996
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000015465.25

Allele description [Variation Report for NM_000233.4(LHCGR):c.1777G>C (p.Ala593Pro)]

NM_000233.4(LHCGR):c.1777G>C (p.Ala593Pro)

Genes:
STON1-GTF2A1L:STON1-GTF2A1L readthrough [Gene - HGNC]
LHCGR:luteinizing hormone/choriogonadotropin receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
2p16.3
Genomic location:
Preferred name:
NM_000233.4(LHCGR):c.1777G>C (p.Ala593Pro)
HGVS:
  • NC_000002.12:g.48688020C>G
  • NG_008193.2:g.72722G>C
  • NG_033050.2:g.163096C>G
  • NM_000233.4:c.1777G>CMANE SELECT
  • NM_001198593.2:c.3441+16340C>G
  • NP_000224.2:p.Ala593Pro
  • NC_000002.11:g.48915159C>G
  • P22888:p.Ala593Pro
Protein change:
A593P; ALA593PRO
Links:
UniProtKB: P22888#VAR_003560; OMIM: 152790.0004; dbSNP: rs121912520
NCBI 1000 Genomes Browser:
rs121912520
Molecular consequence:
  • NM_001198593.2:c.3441+16340C>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000233.4:c.1777G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Leydig cell agenesis
Synonyms:
LEYDIG CELL HYPOPLASIA WITH MALE PSEUDOHERMAPHRODITISM; LEYDIG CELL HYPOPLASIA, COMPLETE; HYPERGONADOTROPIC HYPOGONADISM, MALE, DUE TO LHCGR DEFECT; See all synonyms [MedGen]
Identifiers:
MONDO: MONDO:0009384; MedGen: C0266432; OMIM: 238320

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000035730OMIM
no assertion criteria provided
Pathogenic
(Nov 1, 1996)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

An inactivating mutation of the luteinizing hormone receptor causes amenorrhea in a 46,XX female.

Toledo SP, Brunner HG, Kraaij R, Post M, Dahia PL, Hayashida CY, Kremer H Themmen AP.

J Clin Endocrinol Metab. 1996 Nov;81(11):3850-4.

PubMed [citation]
PMID:
8923827

Male pseudohermaphroditism due to a homozygous missense mutation of the luteinizing hormone receptor gene.

Kremer H, Kraaij R, Toledo SP, Post M, Fridman JB, Hayashida CY, van Reen M, Milgrom E, Ropers HH, Mariman E, et al.

Nat Genet. 1995 Feb;9(2):160-4.

PubMed [citation]
PMID:
7719343

Details of each submission

From OMIM, SCV000035730.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

In two 46,XY sibs with Leydig cell hypoplasia (238320) born to consanguineous parents, Kremer et al. (1995) found homozygosity for a missense ala593-to-pro mutation in the sixth transmembrane domain of the LHCGR gene. In vitro expression studies showed that this mutated receptor binds human choriogonadotropin normally, but the ligand binding does not result in increased production of cAMP. They concluded that a homozygous LH receptor gene mutation underlies the syndrome of autosomal recessive congenital Leydig cell hypoplasia in this family. The 2 sibs had presented with female external genitalia, primary amenorrhea, and lack of breast development. Their parents, who were first cousins, had 14 additional offspring. Both patients had short blind-ending vagina, without uterus or fallopian tubes. Sperm levels of testosterone and testosterone precursors were abnormally low and did not respond to stimulation with human choriogonadotropin. Basal levels of luteinizing hormone were markedly increased. On histologic examination, the gonads were found to be testes with normal Sertoli cells but no mature Leydig cells.

Toledo et al. (1996) evaluated a 46,XX sister of the two 46,XY male pseudohermaphrodites with Leydig cell hypoplasia described by Kremer et al. (1995). The patient presented with amenorrhea due to hypergonadotropic hypogonadism (see 238320), but had structurally normal ovaries. Analysis of her LH receptor genes showed that she was homozygous for the same mutation that caused an ala593-to-pro substitution in her 2 brothers. In vitro analysis of the mutant LH receptor in cultured human embryonic kidney 293 cells showed that the receptor is unable to stimulate adenylyl cyclase in response to CG. These results document the existence of inherited LH resistance as a cause of primary amenorrhea in women.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Sep 1, 2024