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NM_000361.3(THBD):c.1688dup (p.Gln564fs) AND Thrombomodulin-related bleeding disorder

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Jan 15, 2000
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000013553.17

Allele description [Variation Report for NM_000361.3(THBD):c.1688dup (p.Gln564fs)]

NM_000361.3(THBD):c.1688dup (p.Gln564fs)

Gene:
THBD:thrombomodulin [Gene - OMIM - HGNC]
Variant type:
Duplication
Cytogenetic location:
20p11.21
Genomic location:
Preferred name:
NM_000361.3(THBD):c.1688dup (p.Gln564fs)
HGVS:
  • NC_000020.11:g.23047817dup
  • NG_012027.1:g.6848dup
  • NM_000361.3:c.1688dupMANE SELECT
  • NP_000352.1:p.Gln564Alafs
  • NP_000352.1:p.Gln564fs
  • LRG_168t1:c.1688dup
  • LRG_168:g.6848dup
  • LRG_168p1:p.Gln564Alafs
  • NC_000020.10:g.23028454dup
  • NM_000361.2:c.1688dup
Protein change:
Q564fs
Links:
OMIM: 188040.0003
Molecular consequence:
  • NM_000361.3:c.1688dup - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Thrombomodulin-related bleeding disorder (THPH12)
Synonyms:
Thrombophilia due to thrombomodulin defect
Identifiers:
MONDO: MONDO:0013775; MedGen: C3280976; Orphanet: 436169; OMIM: 614486

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000033800OMIM
no assertion criteria provided
Pathogenic
(Jan 15, 2000)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Identification and characterization of a thrombomodulin gene mutation coding for an elongated protein with reduced expression in a kindred with myocardial infarction.

Kunz G, Ireland HA, Stubbs PJ, Kahan M, Coulton GC, Lane DA.

Blood. 2000 Jan 15;95(2):569-76.

PubMed [citation]
PMID:
10627464

Details of each submission

From OMIM, SCV000033800.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

In a man with thrombophilia due to thrombomodulin defect (614486) resulting in an occlusive myocardial infarction at age 52 years, Kunz et al. (2000) found a heterozygous frameshift insertion mutation, 1689insT, in the THBD gene. The mutation predicts an elongated gene product because of substitution of the last 12 C-terminal amino acids by 61 abnormal residues. Pedigree analysis suggested that a brother who had suffered a fatal myocardial infarction probably also carried the mutation. Known risk factors for myocardial infarction, including smoking, increased blood pressure, elevated triglycerides, and elevated cholesterol, were present in the proband and other family members. Carriers of the mutant allele expressed significantly lower amounts of thrombomodulin on the surface of their monocytes and lower levels of soluble thrombomodulin in plasma. Transfection of the mutation in COS-7 cells resulted in reduced cell surface expression of mutant THBD associated with impaired translocation through the endoplasmic reticulum/Golgi apparatus compared to wildtype. In addition, cells expressing abnormal thrombomodulin had a 2.5-fold reduced ability to accelerate the thrombin (F2; 176930)-mediated activation of protein C (PROC; 612283).

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 8, 2024