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NM_000363.5(TNNI3):c.244C>T (p.Pro82Ser) AND Hypertrophic cardiomyopathy 7

Germline classification:
Likely benign (2 submissions)
Last evaluated:
Apr 5, 2018
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000013233.38

Allele description [Variation Report for NM_000363.5(TNNI3):c.244C>T (p.Pro82Ser)]

NM_000363.5(TNNI3):c.244C>T (p.Pro82Ser)

Gene:
TNNI3:troponin I3, cardiac type [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
19q13.42
Genomic location:
Preferred name:
NM_000363.5(TNNI3):c.244C>T (p.Pro82Ser)
Other names:
p.P82S:CCG>TCG
HGVS:
  • NC_000019.10:g.55156239G>A
  • NG_007866.2:g.6494C>T
  • NM_000363.5:c.244C>TMANE SELECT
  • NP_000354.4:p.Pro82Ser
  • LRG_432t1:c.244C>T
  • LRG_432:g.6494C>T
  • NC_000019.9:g.55667607G>A
  • NM_000363.4:c.244C>T
  • P19429:p.Pro82Ser
  • c.244C>T
Protein change:
P82S; PRO82SER
Links:
UniProtKB: P19429#VAR_016078; OMIM: 191044.0003; dbSNP: rs77615401
NCBI 1000 Genomes Browser:
rs77615401
Molecular consequence:
  • NM_000363.5:c.244C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Hypertrophic cardiomyopathy 7
Synonyms:
Familial hypertrophic cardiomyopathy 7; CARDIOMYOPATHY, FAMILIAL HYPERTROPHIC, 7, MODIFIER OF; TNNI3-Related Familial Hypertrophic Cardiomyopathy
Identifiers:
MONDO: MONDO:0013369; MedGen: C1860752; OMIM: 613690

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000033480OMIM
no assertion criteria provided
risk factor
(Jul 1, 2008)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

SCV001294794Illumina Laboratory Services, Illumina
criteria provided, single submitter

(ICSL Variant Classification Criteria 13 December 2019)
Likely benign
(Apr 5, 2018)
germlineclinical testing

PubMed (6)
[See all records that cite these PMIDs]

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Distinguishing hypertrophic cardiomyopathy-associated mutations from background genetic noise.

Kapplinger JD, Landstrom AP, Bos JM, Salisbury BA, Callis TE, Ackerman MJ.

J Cardiovasc Transl Res. 2014 Apr;7(3):347-61. doi: 10.1007/s12265-014-9542-z. Epub 2014 Feb 8.

PubMed [citation]
PMID:
24510615
PMCID:
PMC4849132

Sarcomere protein gene mutations in hypertrophic cardiomyopathy of the elderly.

Niimura H, Patton KK, McKenna WJ, Soults J, Maron BJ, Seidman JG, Seidman CE.

Circulation. 2002 Jan 29;105(4):446-51.

PubMed [citation]
PMID:
11815426
See all PubMed Citations (6)

Details of each submission

From OMIM, SCV000033480.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

Niimura et al. (2002) reported an individual with late-onset hypertrophic cardiomyopathy (CMH7; 613690) in whom they found a missense mutation in the TNNI3 gene. The individual concerned had no family history of hypertrophic cardiomyopathy. The mutation, a C-to-T transition in exon 5, replaced proline with serine at amino acid position 82 (P82S). Proline-82 is highly conserved in mammalian, avian, and amphibian troponin I molecules.

In a 32-year-old African American woman with severe hypertrophic cardiomyopathy and a family history of CMH and sudden cardiac death, Frazier et al. (2008) identified a heterozygous P82S mutation in the TNNI3 gene and a heterozygous missense mutation in the MYH7 gene (160760.0043). Her affected 8-year-old daughter carried only the heterozygous MYH7 mutation, whereas her as yet unaffected 13-year-old son carried only the TNNI3 P82S variant. Frazier et al. (2008) suggested that the P82S variant, which they found in 3% of healthy African Americans, is a disease-modifying mutation in severely affected individuals, and that carriers of the variant might be at increased risk of late-onset cardiac hypertrophy.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

From Illumina Laboratory Services, Illumina, SCV001294794.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (6)

Description

This variant was observed as part of a predisposition screen in an ostensibly healthy population. A literature search was performed for the gene, cDNA change, and amino acid change (where applicable). Publications were found based on this search. The evidence from the literature, in combination with allele frequency data from public databases where available, was sufficient to determine this variant is unlikely to cause disease. Therefore, this variant is classified as likely benign.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 3, 2024