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NM_000525.4(KCNJ11):c.67A>G (p.Lys23Glu) AND Diabetes mellitus type 2, susceptibility to

Germline classification:
risk factor (1 submission)
Last evaluated:
Dec 1, 2009
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000009214.19

Allele description [Variation Report for NM_000525.4(KCNJ11):c.67A>G (p.Lys23Glu)]

NM_000525.4(KCNJ11):c.67A>G (p.Lys23Glu)

Genes:
ABCC8:ATP binding cassette subfamily C member 8 [Gene - OMIM - HGNC]
KCNJ11:potassium inwardly rectifying channel subfamily J member 11 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
11p15.1
Genomic location:
Preferred name:
NM_000525.4(KCNJ11):c.67A>G (p.Lys23Glu)
Other names:
E23K
HGVS:
  • NC_000011.10:g.17388025T>C
  • NG_012446.1:g.5635A>G
  • NM_000525.4:c.67A>GMANE SELECT
  • NM_001166290.2:c.-16-179A>G
  • NM_001377296.1:c.-24A>G
  • NM_001377297.1:c.-16-179A>G
  • NP_000516.3:p.Lys23Glu
  • NP_000516.3:p.Lys23Glu
  • NC_000011.9:g.17409572T>C
  • NM_000525.3:c.67A>G
Protein change:
K23E; GLU23LYS
Links:
OMIM: 600937.0014; dbSNP: rs5219
NCBI 1000 Genomes Browser:
rs5219
Molecular consequence:
  • NM_001377296.1:c.-24A>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
  • NM_001166290.2:c.-16-179A>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001377297.1:c.-16-179A>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_000525.4:c.67A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Diabetes mellitus type 2, susceptibility to
Identifiers:
MedGen: C3837967

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000029432OMIM
no assertion criteria provided
risk factor
(Dec 1, 2009)
germlineliterature only

PubMed (7)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

Missense mutations in the pancreatic islet beta cell inwardly rectifying K+ channel gene (KIR6.2/BIR): a meta-analysis suggests a role in the polygenic basis of Type II diabetes mellitus in Caucasians.

Hani EH, Boutin P, Durand E, Inoue H, Permutt MA, Velho G, Froguel P.

Diabetologia. 1998 Dec;41(12):1511-5.

PubMed [citation]
PMID:
9867219

Analysis of separate and combined effects of common variation in KCNJ11 and PPARG on risk of type 2 diabetes.

Hansen SK, Nielsen EM, Ek J, Andersen G, Glümer C, Carstensen B, Mouritzen P, Drivsholm T, Borch-Johnsen K, Jørgensen T, Hansen T, Pedersen O.

J Clin Endocrinol Metab. 2005 Jun;90(6):3629-37. Epub 2005 Mar 29.

PubMed [citation]
PMID:
15797964
See all PubMed Citations (7)

Details of each submission

From OMIM, SCV000029432.5

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (7)

Description

Hani et al. (1998) identified a glu23-to-lys (E23K) amino acid substitution in the KCNJ11 gene by molecular screening using SSCP and direct sequencing in 72 French Caucasian families with type 2 diabetes (125853). They genotyped this variant in French cohorts of 191 unrelated type 2 diabetic probands and 119 normoglycemic control subjects and performed association studies. Homozygosity for lys23 (KK) was more frequent in type 2 diabetic than in control subjects (27 vs 14%; p = 0.015). Analyses in a recessive model (KK vs EK/EE) showed a stronger association of the K allele with diabetes. In a metaanalysis of their data for the E23K variant and data obtained from 3 other Caucasian groups, Hani et al. (1998) found the E23K variant to be significantly associated with type 2 diabetes.

Hansen et al. (2005) investigated the separate and combined effects of the PPARG pro12-to-ala (P12A; 601487.0002) and the KCNJ11 E23K polymorphisms on risk of type 2 diabetes. The combined analysis involved 1,164 type 2 diabetic patients and 4,733 middle-aged, glucose-tolerant subjects. In the separate analyses, the K allele of KCNJ11 E23K associated with type 2 diabetes (odds ratio, 1.19; p = 0.0002), whereas PPARG P12A showed no significant association with type 2 diabetes. The combined analysis indicated that the 2 polymorphisms acted in an additive manner to increase the risk of type 2 diabetes, and the authors found no evidence for a synergistic interaction between them. Together, the 2 polymorphisms conferred a population-attributable risk for type 2 diabetes of 28%. The authors concluded that their results showed no evidence of a synergistic interaction between the KCNJ11 E23K and PPARG P12A polymorphisms, but indicated that they may act in an additive manner to increase the risk of type 2 diabetes.

Laukkanen et al. (2004) found an additive effect of a high risk ABCC8 (600509) haplotype, composed of a silent polymorphism (AGG-AGA; arg1273 to arg) and 3 promoter polymorphisms, and the 23K allele of the KCNJ11 gene.

In genomewide association studies of type 2 diabetes involving genotype data from a variety of international consortia, the Diabetes Genetics Initiative of Broad Institute of Harvard and MIT, Lund University, and Novartis Institutes for BioMedical Research (2007), Zeggini et al. (2007), and Scott et al. (2007) confirmed association of the E23K polymorphism (rs5219) with diabetes susceptibility. Although this association was not strongly observed in any single scan, all-data metaanalyses resulted in genomewide significant association (OR = 1.14, p = 6.7 x 10(-11)).

Association with Impaired Exercise Stress Response

Reyes et al. (2009) found that the E23K polymorphism was overrepresented in 115 individuals with dilated cardiomyopathy (see 115200) and congestive heart failure (CHF) compared to 2,031 community-based controls (p less than 0.001). In addition, the KK genotype, which was present in 18% of the CHF patients, was associated with abnormal cardiopulmonary exercise stress testing: despite similar baseline heart rates among genotype subgroups, individuals with the KK genotype had a significantly reduced heart rate increase at matched workload, at 75% of maximum oxygen consumption, and at peak VO(2), compared to those with the EE or EK genotypes. Noting that the glu23 residue is located within the functionally relevant intracellular slide helix region, Reyes et al. (2009) suggested that E23K might represent a biomarker for impaired stress performance.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 10, 2024