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NM_000388.4(CASR):c.2693G>A (p.Arg898Gln) AND Epilepsy, idiopathic generalized, susceptibility to, 8

Germline classification:
risk factor (1 submission)
Last evaluated:
Aug 1, 2008
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000008864.5

Allele description [Variation Report for NM_000388.4(CASR):c.2693G>A (p.Arg898Gln)]

NM_000388.4(CASR):c.2693G>A (p.Arg898Gln)

Gene:
CASR:calcium sensing receptor [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3q21.1
Genomic location:
Preferred name:
NM_000388.4(CASR):c.2693G>A (p.Arg898Gln)
HGVS:
  • NC_000003.12:g.122284647G>A
  • NG_009058.1:g.105965G>A
  • NM_000388.4:c.2693G>AMANE SELECT
  • NM_001178065.2:c.2723G>A
  • NP_000379.3:p.Arg898Gln
  • NP_001171536.2:p.Arg908Gln
  • NC_000003.11:g.122003494G>A
  • NM_000388.3:c.2693G>A
Protein change:
R898Q; ARG898GLN
Links:
OMIM: 601199.0050; dbSNP: rs121909269
NCBI 1000 Genomes Browser:
rs121909269
Molecular consequence:
  • NM_000388.4:c.2693G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001178065.2:c.2723G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Epilepsy, idiopathic generalized, susceptibility to, 8
Synonyms:
Epilepsy, idiopathic generalized 8
Identifiers:
MONDO: MONDO:0013032; MedGen: C2752062; OMIM: 612899

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000029074OMIM
no assertion criteria provided
risk factor
(Aug 1, 2008)
germlineliterature only

PubMed (2)
[See all records that cite these PMIDs]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

An idiopathic epilepsy syndrome linked to 3q13.3-q21 and missense mutations in the extracellular calcium sensing receptor gene.

Kapoor A, Satishchandra P, Ratnapriya R, Reddy R, Kadandale J, Shankar SK, Anand A.

Ann Neurol. 2008 Aug;64(2):158-67. doi: 10.1002/ana.21428.

PubMed [citation]
PMID:
18756473

Calcium sensing receptor mutations implicated in pancreatitis and idiopathic epilepsy syndrome disrupt an arginine-rich retention motif.

Stepanchick A, McKenna J, McGovern O, Huang Y, Breitwieser GE.

Cell Physiol Biochem. 2010;26(3):363-74. doi: 10.1159/000320560. Epub 2010 Aug 24.

PubMed [citation]
PMID:
20798521
PMCID:
PMC3709174

Details of each submission

From OMIM, SCV000029074.4

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (2)

Description

In affected members of a large 3-generation Indian family (family 1) with idiopathic generalized epilepsy (EIG8; 612899), Kapoor et al. (2008) identified a heterozygous c.2693G-A transition (c.2693G-A, NM_000388) in the CASR gene, resulting in an arg898-to-gln (R898Q) substitution at a highly conserved residue located close to 3 potential phosphorylation sites. The mutation segregated with the disorder in the family and was not detected in 504 control chromosomes. Seizure types in this family were variable, but included myoclonic seizures, absence seizures, febrile seizures, complex partial seizures, and generalized tonic-clonic seizures. None of the patients had electrolyte abnormalities. Four additional possibly pathogenic variants in the CASR gene were identified in 5 of 96 unrelated patients with juvenile myoclonic epilepsy from southern India.

Stepanchick et al. (2010) found that the R898Q mutation resulted in extracellular calcium-stimulated ERK1 (MAPK3; 601795)/ERK2 (MAPK1; 176948) phosphorylation levels equal to or greater than those of wildtype CASR, suggesting that this mutation induces a gain-of-function phenotype.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 3, 2024